Strain | Pseudomonas putida H8234, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AACTCGATGACACCTTCGGTGCACAGCCGCTTTAGCACTTCACGCACGCTGAGGAACGACAGCGGTATGTCCAGTTGTTCCAGTTGTGCGTGCACGCCGC GTACGCCAATGCTGCGGCCATTGCGGTCGGCGGTGTGCAGGGCATCGATCACCTTGAGCCGGATCAGGCTGGTACGCAGACCGAAAGTACGCAGGAGCTC GCGGATCTGTTCGTTGCCGATGCGTTCTTCAGAAAAAACGTCCTGTCCGTTGGGCGCTTTGCCTGGGACGCGCCCGGCCTGGGTCGAGGGTTGCGGGTTG TACATGTGAATGCTCCTTTTCGTGGACGAACCCGAAATGTGGTTGCCTCACTAACTAGGACGAATGAGAACGCAAAAACTGCAACCCACCCGTAAAAAAA ATGGTGTTCTTCTTCAAGACGTTCCATTGCCCGGTAACACGTAAAATTTTCATCTGGCCATTCGTCTGATCGGGATAGAGCCCGAACCCGAGGAGTGCCC
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DNA Sequence for Gene |
>L483_12680
GTGTTTCCACTTTCCCATCCCATGACGTGCGCAGGCCTGGCCGCTGCGCTGTTGGCGGTGAGCGTTGCCGTACACGCGCAGCCCGCCACTGATGCCAGCG CGCAGATTCGTCGAACCAGTTTCGGGGTGCCGCATATCGTGGCCAAGGATGAGCGCGGCCTGGGCTATGGCGTCGGCTATGCCTATGCCCAGGACAACCT GTGCCTGCTGGCCAACGAGGTGCTGACCGTCAGTGGTGAGCGCTCACGCCATTTTGGTGCCAACGGCAAGACCCTGGAGCAGCGTGACAACCTGGCCAGC GACGTGTTTTTCACTTGGCTCAACAGCCCAGTGGCGGTCGATACGTTCCTGCAGGCGCAGCCGGCGCAGGTGCAAGCATTGCTGGCGGGTTATGCCAGCG GCTACAACCGGGCGCTGGCCGAGCGCCGCCGCGGGGGGCTACCCGCCGAATGCGGTAACGGTGAGTGGTTGCGACCGATCACCAGCCAGGACCTGGTCAA GCTGACCCGTCGCCTGTTGGCCGAGGGTGGCGTCGGGCAGTTCGTCGAGGCGCTGGCAGGCGCGCAACCCCCTGCACAGGCTCGCCAGCAGGCGCCGGCA GGCTTCGCCGCTGCGCTGGCGTGGCAAGCGCGCTTTGCCACGGAGCGCGGTAGTAATGCGGTGGCGGTCGGGGCACAGCGTTCGGCCAATGGCCGTGGCC TGTTGCTGGCCAACCCGCATTTCCCGTGGATGGGCGGCATGCGCTTCTACCAGATGCAGTTGACCATTCCCGGCCAGCTCGATGTGATGGGCGCGGCATT GCCGGGCCTGCCGGTGGTCAACATTGGTTTCAACAGGCACCTGGCCTGGACGCATACCGTCGACACGTCCAAACACTTCACTTTGTACCGGCTGCAGCTC GACCCCAAGGACCCGACCCGCTACCTGCTGGATGGCAAGTCGCTGCCATTGGCCCGGCAAACCATCAGCGTTGCCGTCAAGGCTGAGGATGGCAGCCTCG GTCAGGTGGAGCGGCAGGTCTACAGTTCGCAATTCGGCCCGGTGGTGCAATGGCCCGGGCGCCTGGATTGGGATGCGCATGTGGCCTACAGCTTGCGTGA CGCCAACCTCGACAACACCCGGGTGCTGCAACAGTGGTACCAGATCAATCGTGCCGATAACCTGGCAGCGTTGAAAGGCTCGGTCGAGCAGTTGCAGGGT ATCCCTTGGGTCAACACCCTGGCCGTGGACCCAGGGGGGCGGGCGTTGTACCTGAACCAATCGGTGGTGCCATATGTGGATCAGCAACTGCTCGGCGCTT GCAGCACCCCGCAAGGGCAAGGGCCCGTAGTGGTGCTGGACGGCTCGCGTAGCGCCTGCCAATGGAAGATCGACGCGAACGCTGCGCAACCGGGAATCTT CCCGGCGCGACTGCTGCCGAGCCTTGAACGCGAGGACTTCGTGCAGAACTCCAACGACCCGGCCTGGTTGGCCAACCCGGCGCAGCCGCTGACCGGCTAT TCACCCTTGATCAGCCGCAGTGACCAGCCGCTGGGCATGCGCGGCCGTTTCGCCCTGCAGCGCCTGCAGGGCACGGCAAGACTGAGCGTTGATGACTTGC AGCGCATGGTGACCGACGACGAGGTTTACCTGGCCAGCCTGGTGCTGCCAGACCTGCTGCAATGGTGCCAGGGCGCCGCCATAGAGGTACAGGCCGTGTG CAGCAGCCTGGCTGCCTGGAATGGCAAGGCCGACCTCGACAGTGGCATTGGTCTGGTGCATTTCCAGAACCTGTTCACTGCCCTGGCCGAGCACCCGGAA AGCTGGCGTGTGGCCTTTGACCCGGCAGACCCGCAGCACACGCCCCGTGGTCTGGCGGTGGAGCAGGCGGCCGTGCGCAAACGGGTGCGTGACGCGGCAC TGGCGTCGCTCAAGCAGGTGAACGACAGCGGTGTCGCGGAGGGGACGCGTTGGGGGCAGGTGCAGCAGGCGCTCGATGGCACGCCGGTACCCGGTGGTCC GCAGGCTCTGGGCGTGTACAACGCGATGTACAGTGTGCCGCACGGGCAGGGCAAGCGGTTGGTGGTCAGCGGTACCAGCTACCTGCAACTGGTCAGCTTC ACCGACAAAGGGCCAGAGGCTCGTGGGTTATTGGCATTCTCCCAGTCGAGCGAAGCGGCTTCAGCCCATGCCAGTGACCAGACCAAGGCATTTGCGGCCA AGCAACTGGCGGTGATTCCGTTTACCGAGGCGCAGATCAAGGCAGACCCGGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAAGGGGCGGTGGTTCA GCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCATTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTACGCCACAGATTTTCATACCTGTGGTGTACCGGTGGGAGCGGGCTTGCCCGCGAAAGGG CCGGTACTGCCAGTCCTGTAATGTCAGGCAAACTCGAACGGCGCCAGCTGAAACCCTTGCTCATCTACTTGCAAGGCCCAGCCGCGGCGGTCCCAGTCGC CCAGCACGATGCGCCGTGCCGGTTCCCCATCAACCACCAGCTTGTGAATCGCTGGCCGGTGGGTATGGCCATGCACCAGCGTGCGCACGCCATGCGCCGC CATCACCTTGGGTACTTCCTCCGGTGTGACGTCGACAATTTCGGTGGACTTCATCCGCACTTGCGTGCTGCTTTCGCTGCGCAGTTTGCGCGCCAGCTTG TAGCGGGCTGACAGCGGCAGGTGACGCAAGACCCACAAGCTCAGCGGGTTGCGCAGCAAGCGGCGCATTTTCATGTAACCCAGGTCGCGGGTGCACAAGG
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Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MFPLSHPMTCAGLAAALLAVSVAVHAQPATDASAQIRRTSFGVPHIVAKDERGLGYGVGYAYAQDNLCLLANEVLTVSGERSRHFGANGKTLEQRDNLAS DVFFTWLNSPVAVDTFLQAQPAQVQALLAGYASGYNRALAERRRGGLPAECGNGEWLRPITSQDLVKLTRRLLAEGGVGQFVEALAGAQPPAQARQQAPA GFAAALAWQARFATERGSNAVAVGAQRSANGRGLLLANPHFPWMGGMRFYQMQLTIPGQLDVMGAALPGLPVVNIGFNRHLAWTHTVDTSKHFTLYRLQL DPKDPTRYLLDGKSLPLARQTISVAVKAEDGSLGQVERQVYSSQFGPVVQWPGRLDWDAHVAYSLRDANLDNTRVLQQWYQINRADNLAALKGSVEQLQG IPWVNTLAVDPGGRALYLNQSVVPYVDQQLLGACSTPQGQGPVVVLDGSRSACQWKIDANAAQPGIFPARLLPSLEREDFVQNSNDPAWLANPAQPLTGY SPLISRSDQPLGMRGRFALQRLQGTARLSVDDLQRMVTDDEVYLASLVLPDLLQWCQGAAIEVQAVCSSLAAWNGKADLDSGIGLVHFQNLFTALAEHPE SWRVAFDPADPQHTPRGLAVEQAAVRKRVRDAALASLKQVNDSGVAEGTRWGQVQQALDGTPVPGGPQALGVYNAMYSVPHGQGKRLVVSGTSYLQLVSF TDKGPEARGLLAFSQSSEAASAHASDQTKAFAAKQLAVIPFTEAQIKADPEYREVVISERDKGAVVQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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