Strain | Pseudomonas putida H8234, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTCGCAGGTCTTCTCGGCAGACCCATACCTTAACCGATGGTGGTTTATCCGGCGCAAAATCCTCGACGCCACCTGTTGCCCCTTCGACCTCTGGACGATT GTAATCGTTCGAAGCCTCTGGCACTCACAAGATAGTAGGCGCCGCGAATGGGATTGCTCAAGGTGGCAGTGGCTAAAAAAGGGTGAAAATGCTGAGAGAG CGACTCTTCCCTGTACGCTCAATAGCCGCCGGATGTTGTAGGGCTTAAGACGTCCAAAGACAGTTAAAGTCACCGTTAGTTCAACAAAAAAGTTCCTGTA CTACAACAGCTTGGGAACCGTGCACGTTTTTTTCACGTGCGCGTCGCAAATCTTGTCGGGACGGCGTCTAGCCACATTTTTTTTGCAGTTCTTGCGCTCA GTCAGTTTACTTACTACAAGTAATGGGTACTATGTACGCCGGCCAGTTTCTCTTTCCTGAGAGATGGCTCTTTAATAGAAAGTCCTTGAAGGGGAACACG
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DNA Sequence for Gene |
>L483_09370
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCTCTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGTATCCAAAGAAACCGAAGCTCGTCTGACTGCGA CTGAAGACGCAGCAGCTCGCGCTCAAGCTCGTGCTGACGAAGCCTACCGTAAGGCTGACGACGCACTGGCAGCCGCTCAGAAGGCTCAGCAGACCGCTGA CGAAGCCAACGAGCGCGCTCTGCGTATGCTGGACAAAGCCAGCCGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAATCCTCACGGATTGTTAAGAAGCCGACCCACTTGTGGGTCGGCTTTTTTATTGCCTGCCAGCCAGGCAAACACGCCCGACATTCACGAAAAGGCCCGC ACTTAGGCGGGCCGTGATGTGTCGCAATTACCTTACTGCAGTTCAGGCGGAATGCTCGACACCATTGGCGCGCCACCCTGGGTCTCGACCGGCACGGCAA TTTCTACCGGCATGCCATCTTCTGCAGCCACCACGTCACGCACCATGTCCCAGTTCATGCGCAGGTTATTGGCCAAGTCTTCACGCTTGAGCAGCGCATT GATAACTGCGGTGTGTTTGTCGACCACCGAAGGGTTACCCTGATCGTCCAGCGGCGTGTGCGCCTCCAGATAGACCTTGCCGCCGCTGATACCGAACTTG TAAGGCTCATTGATGATGCGCACCGGAGTGCCCACAGGCACCATCTTCGACAGTTCCAGCACGTTGTTGTTGAGCATCCGGAAGCAGCCGTGGCTGGTAC
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Amino Acid Sequence |
>Major outer membrane lipoprotein
MNNVLKFSALALAAVLATGCSSVSKETEARLTATEDAAARAQARADEAYRKADDALAAAQKAQQTADEANERALRMLDKASRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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