Pseudomonas putida H8234, L483_07735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAAAAGCTGTGTGTCGACGAGTTTCAGGAATTGGGCTTCGAGCTGAACCTGGAATTCAAGGAAGATCTGGATGACCAGGCAATCGATGCTTTCCTCGATG CGTTCCTGGAAGAAGCGATGGACGCCAACGGCCTGGACTATGTAGGCGGTGACGATTACGGCCTGGTGTGCTCGGTCAAACGCGGATCGGTCAGCGAAGA ACAGCGTGCTGCCGTTGAAACCTGGCTCAAGGGCCGTAGCGAACTGACCAAGATCGAAGTCAGCCCGCTGCTGGACGCCTGGTACCCGGAAAAGCCGATC AACAAGGCTGAGTGATACCTGCCTGGCTTGATCGCTGAAAAGGCTGCCCTTGTGGTGGCCTTTTTTATTGGCGGTGCTTTTCCGTCGAACGTGGCGCATC GTCGCTACGCTTGGGGCATAATGCGTACTCTTTCGTCGTGGGGCCATCATCTCTTACAGCCCCAATGCCCTTTTCCCTCGCCGCAGGGTATTTATCCATT
|
|
| DNA Sequence for Gene |
>L483_07735
ATGATCAAAACGCTTCGTCCCCTCATTCTGGCAAGCCTGCTGTTGCCACTCGCATTGCCCAGCCAGGCCGCCACCGTCAATACCACCCTGCCCGCCAAAG TGCAGCAGGCGCTCAAGGCCAACAAGCTGCAGGACACGGCCCTGTCGCTGGTCATGCTGCCGCTGGACGGCCCCGGCACGCCCACCGTGTTCAATGCCGA TGTGTCGGTGAACCCGGCCTCGACCATGAAACTGGTCACCACCTACGCGGCCCTCGAACTGCTCGGCCCGACCTTCCAGTGGAAAACCGAGTTTTATACC GACGGTACCCTGAGCAATGGCGTGCTCAACGGTAACCTGTACCTTAAAGGTGGCGGCGACCCGAAACTGAACATGGAAAAGCTGTGGCTGCTGATGCGTG ACCTGCGCGCCAATGGCGTGCGCACCATCACCGGTGACCTGGTGCTGGACCGCAGCCACTTCGTACAGCCCAACCTGCCGCAGTTCAACGATGACGGCGG CGATGAAAACAAGCCGTTCCTGGTCAAGCCCGATTCGCTGCTGGTCAACCTCAAGGCGCTGCGCTTCGTGGCCCGCAACGATGGCGGCAAGGTGACCGTT GCGGTCGAGCCACCGATTGCCAGCATCCGCATCGACAACCAGGTCAAGGCGGTGGCTTCGAAGCAGTGCACAGGCGATGTGCGCTACAACCCGGTGCCAC AGGCCGATGGCATCAGCGTCACCGTCAGCGGCCAGCTGGGTGACGGCTGCAACTCGCAGACCTACCTGTCGCTGCTCGATCACGCCACCTACGCCGCCGG TGCCGTGCGCGCCATCTGGAACGAGCTGGGTGGCAGTATCCAGGGTGGCGACCGCATCGAGAATGTACCCAAGAGTGCTCGCCTGCTGGCCCGCGCCTTC TCGCCAGACCTGGTGGAAGTGATCCGTGACATCAACAAGTACAGCAACAACACCATGGCCCAGCAGCTGTTCCTGAGCCTTGGCGCGCAGTTCCGCACCG ATGCCGATGGGGACGATGCCCGCGCCGCCCAGCGCGTGGTGCGCCAGTGGCTGGCAAAAAAGGGCATTACCGCGCCGCATCTGGTCATGGAGAACGGCTC TGGCCTGTCGCGTGCCGAGCGGGTCAGCACCCGGGAGATGGCCCAGATGCTGCAGGCCGCCTGGAAGAGCCCCTACGCTGCCGAATTCATGAGCTCCATG CCGCTGGTGGGCATGGACGGCACCATGCGCAAGCGCCTGAAGCGCACTGCCATGACCGGTGAAGGCCACATCAAGACCGGCACGCTGAATACCGTGCGGG CAATTGCCGGCTTCAGCCGCGACAGCAACGGCCATACCTGGGCGGTGGCGGCGATTCTCAACGACCCGAAACCGTGGGGTGCTTCGCAGGTGCTCGACCA GGTCCTGCTGGACCTGTACCGCCAGCCGAAGCTGGCCGGCAGCACAGCGGCCAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTGGCTGGTCCGTACCGGCCCTTTCGCGACTGAGAGCAAGTGTCTTGCGCAAACTGTGACAGTTTGCGCGATCACTGTGGGAGCGGCTTTAGCCGCGAAA GGGCCGGCACAGACAGCTGGCAGCTAACAGGCCGACTCCCCCTCCACCCGGTCCCGCCCGGCCTGTTTCGCGATGTAAACACCCGCATCAGCCCGTAGCA GCAAGGCATCGGCACCCTCCCCCGGCCGCCAGCCAGCCACACCAAAACTCGCGGTCACCTGGCCCACGCCTTCCACCGGCAACGTGCGCACCCCTTGCCA TAACTCAAGCGCTAACAACCGCGCCTGCTCAGCATCACTGCCCGGGCACAGCACCATGAATTCTTCCCCGCCCAGCCGGCAGAACACATCAGTACGCCGC AAACGCTGGCCGATACGCTGGCACAAGCTGCGCAGCACGCGATCGCCCATGGCATGGCCGAAGCGGTCGTTGATGCATTTGAAGTGATCGATGTCGAGCA
|
|
| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MIKTLRPLILASLLLPLALPSQAATVNTTLPAKVQQALKANKLQDTALSLVMLPLDGPGTPTVFNADVSVNPASTMKLVTTYAALELLGPTFQWKTEFYT DGTLSNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVRTITGDLVLDRSHFVQPNLPQFNDDGGDENKPFLVKPDSLLVNLKALRFVARNDGGKVTV AVEPPIASIRIDNQVKAVASKQCTGDVRYNPVPQADGISVTVSGQLGDGCNSQTYLSLLDHATYAAGAVRAIWNELGGSIQGGDRIENVPKSARLLARAF SPDLVEVIRDINKYSNNTMAQQLFLSLGAQFRTDADGDDARAAQRVVRQWLAKKGITAPHLVMENGSGLSRAERVSTREMAQMLQAAWKSPYAAEFMSSM PLVGMDGTMRKRLKRTAMTGEGHIKTGTLNTVRAIAGFSRDSNGHTWAVAAILNDPKPWGASQVLDQVLLDLYRQPKLAGSTAAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|