Pseudomonas putida H8234, L483_05930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGGTTTGATGCAGCCCTGGCGTTTCATTCGCATCACCCAGCGTGACCTGCGTACCCGCATCCAGGCCTTGGTGGAGGCGGAGCGTCTGCGCACTGCCG AGGCATTGGGCGAGCGGGCTGATGACTTCATGAAGCTGAAGGTAGAAGGCATCAATGACTGTGCCGAGCTGCTGGTAGCGGCCTTGATGGACAACCGCGA GCCGCACATCTTCGGCCGTCGCACCCTGCCGGAGATGGACCTGGCCTCGCTGGCCTGCGCCATTCAGAACCTGTGGCTGACGGCCCGTGGCGAAGGGCTG GGCATGGGCTGGGTGTCGCTGTTCGACCCTCTGGCGCTGGCAGCACTGCTGGGTATGCCGGAAGGGGCCAAACCGGTGGCGGTGCTGTGCCTGGGACCCG TGACCGAATTTTACCCTGCACCCATGCTGGTGCTGGAAAACTGGGCCGAAGAACGGCCTTTGAGTGACATGTTGTACGAAAACCAATGGGGAGAGCGCCA
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| DNA Sequence for Gene |
>L483_05930
ATGAGCGTGGCCTTGCTGACCATGGCCGGGGTGGCCCTGGATGCCTTGCTGGGCGAACCGCAGCGGCGCCACCCGCTGGTGGCCTTCGGCAATATGGCCG GTAACCTGGAGCGCCGCCTGAATGCAGGTGGCCGCGGCTGGCGCAGCCACGGCGTGAGTGCGTGGTTTCTGGCGGTGGTGCCGCTGACCCTGGTGGCGCT GATCCTGTCCTGGCTGCCGTACATCGGCTGGCTGGTGGATGTGCTGGCGCTGTACTGCGCCCTGGGCCTGCGCAGTTTGGGCGAACATGTGCTGCCGGTG GCCAACGCCTTGCGCCAGGGCGACCTGGAGGAAGCCCGACGCCGCGTCGGCTACCTGGTCAGCCGCGAAACCCGGGAGCTGGACGAGCCCGCCGTGGCCC GCGCAGCCACCGAGTCGGTACTGGAAAACGGCAGTGACGCGGTGTTCGCCGCGCTGTTCTGGTTTGTGGTGGCCGGCGCGCCGGGCGTGGTGCTGTACCG CCTGAGCAACACCCTGGATGCCATGTGGGGGTATCGCAACGAACGCTTCGAGCGCTTCGGCTGGTGCGCGGCGCGCATTGATGATGTGCTCAACTATATT CCCGCAAGGCTGGTGGCGCTGACTTACGCACTGCTGGGCAAGACCCGCCTGGCGCTGGCTTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACG CCGGACCGGTGATGGCCGCCGGTGCCGGAGCACTCGGTGTAGCCCTGGGCGGCCCGGCTGTTTACCACGGCGAACTGCATGAGCGGCCACGCCTGGGCGA AGGGCCGATGGCTGACGCCGATGCCATCGAGCGTGGCTGGAGCCTGGTGCAGCGCGGCGTGTGGCTGTGGCTGTTGTTGATCTGCCTGGGGGCTTACATC AATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACACGGTGGCCGCCTGCTGCGTGCGGTGCAACATTACGGTATCCCTCGCGAGCAGTGGCTCGACCTGTCCAGCGGCATCGCGCCCTGGCCGTTCCCGATC CCGCCGATACCTACAGATGCCTGGGCTCGCCTGCCTGAGACCGAAGACGGCCTGGAGGCGGCGGCACGCGGGTATTACGGCGCCCGCGAGCTGCTGCCGG TGGCGGGTTCCCAGGCGGCGATCCAGGCTTTGCCGCTGCTGCGTGCGGCTGGCCGGGTAGGGGTGCTGTCGCCGTGCTATGCCGAACACCCGTATGCCTG GCATCGGGCGGGCCATCATCTGGTCGAGCTGGATGAAACGCAGGTCGAGGCGATGCTCGACAGCCTCGACGTGCTGGTGCTGGTCAACCCCAATAACCCG ACCGGGCAGCGGGTACCGCGTGAGCGCCTGCTGGGCTGGCACGCGCGCCTGGCTGCACGCGGTGGCTGGCTGTTGGTCGACGAAGCGTTCATGGACAACA
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| Amino Acid Sequence |
>cobalamin biosynthesis protein CobD
MSVALLTMAGVALDALLGEPQRRHPLVAFGNMAGNLERRLNAGGRGWRSHGVSAWFLAVVPLTLVALILSWLPYIGWLVDVLALYCALGLRSLGEHVLPV ANALRQGDLEEARRRVGYLVSRETRELDEPAVARAATESVLENGSDAVFAALFWFVVAGAPGVVLYRLSNTLDAMWGYRNERFERFGWCAARIDDVLNYI PARLVALTYALLGKTRLALACWRKQGPLWDSPNAGPVMAAGAGALGVALGGPAVYHGELHERPRLGEGPMADADAIERGWSLVQRGVWLWLLLICLGAYI NA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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