Pseudomonas putida H8234, L483_04015
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGTGCACTGAAAGGACTAACTTTACCCCCGTCCTCATTAGCACTTGCACCGCAAGAAGGTAGTTTCAAATGTCCAACAGTATGGGTATTGCCAGCGTCT TCGTTCTGTCTTCCCTGTTGTTGTCGCCCCTGGCCATGGCCGAAGAATCCAGCGCTTTCGTCACCCGCAATGCAGAGCTCGCCGCCGTCCATCAAGAGGC CCGCGACGCTGTAGCAGCAAACAAGGCAGAAGCCACCAAATCCCCAGAACAGACCGCTTCCAAAGTTTCTGTCGATGCCAATGCCGACAGCTGATCAAGC GCTGTTGCTGCTCCCGATTTCCCTTGGCTACACCATGGGCACCACCGGTGCCGATATGTTAGCCTTTTAAAGCCGCTGCCGATCAGCGGCTTTTTTTATG TGCTTTAAACCTCAGCCCGGCTGTAACGTCTACCTAAAAAAAAAGACGCACATTCAAAAATAAAAACTGCCCCACCGTCAGACCAAAGGAGCTAGTACCG
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| DNA Sequence for Gene |
>L483_04015
GTGCCTTCCGCGTTTCGCTTTACCCCGCTGTTCATTGCGTTGACTGCAACGATCCCTGTCGCCGCCCAGGCAGATGAAGACAAGGCTGATGGCTTCATTG AAGGGTCGTCCTTCAACCTGCACTTTCGTAATGCCTACTTCAACCGCGACAACCACAACGCTGGCGTGCGTGACACCCGCGAGTGGGGCCAGGGCGCGGT TGCGCGCTTCGAGTCGGGCTACACCCCAGGCGTAATCGGCTTCGGCCTGGATGCCCACGCCATGCTGGGCCTCAAGTTGGACGGCGGTGGCGGCCATGCC GGCACCAGCATCCTGCCCGAGCACATCAAGGACGACGGTGAGCTGGGCGCTGCCCCGCATTCGTTCTCCACTGCCGGTGCTGCGGTCAAGCTCAAGGCGT TCGACACCGAGCTGAAAGCCGGTGACTTGTTCCTCACCAACCCGGTGATCGCGGGCGGCGAAACCCGCATGCTGCCGCAGACCTTCCGTGGTGTGAGCCT GACCAACACCAGCATCGACGGCCTGCTGCTCGAAGGCGGCCAGGTGAGCTTTACCCACCCGTACAACCAGAGCGGCCACCGCCGCATCGACACCTACTAC GGTTCGCTGGACGAGCACGACAAGAGCAAGCACCTGAACTGGGCCGGCGCGTCATGGAGCGGTACCGAGAACATCACCAGCAACCTTTACGCCGCCGAGC TGAAGGACATCTGGAACCAGTACTACGCGGACTTCGACTACACCTACGTGGTCAACGACCTGGTCAGCCTGAACCCGGGCGTGCACTTCTACCACACGCA GGACACCGGCCAGGCCCTGCTGGGCAAGATCGACAACAACACCTACAGCGTGCACTTCACCGTCAATGCGGGCTTCCACAGCGTCACCGCCGCCTACCAG CGGGTCAATGGCAATACGCCATTCGACTACATCAACCTGGGCGACAGCGTGTATCTGGACAACTCGCGCATGTACTCGGACTTCAACGCGCCAAACGAGC GCTCGTGGAAGCTGCAGTACGACTATGACTTCGCCGGAGTAGGCGTGCCTGGCCTGACCACCTCGCTGTCGTACTCGCGCGGCGAGGCCGATCTGACCAA AGCCACCCAGGACACCAGCCACTACGACTACTACCGTGAAGATGGCAAGAACGCCATGCACTGGGAACGTGACCTGGACGTGAAGTACGTGTTCCAGGAG GGTGACCTGAAGGACCTGTCGGTACTGGTGCGCTATGCCACTCACCGTGGCAGCCAGGGGTATGCGTCGATCGACAGCAACAGCGACAACGATGAAGTGC GGGTGATCGTCGACTACCCACTGAACGTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGGACCGCTAGCGAGGGCTGCGCCCTCGATCGCCGGCAAGCCAGCTCCCACAGGTACTGCATAACCGCTAAGCCTGTTGCTGTACCTGTGGGAGCTG GCTTGCCGGCAAAGGGCTGCGCAGCAGCCCCAGACGTGATTCCGTCGGACAAATCTTGTCCGACAATCACTGCTTCCCTAGAATATCGCCGCCGCGAATG GCCCTGCCCACGCAGTAGCGAGCATGCCCACCCGATTACCGCGTTTCGCATTTCTCAGGTCGCACCCCGAGCTGGCCCTCAACCTGGGCAGTTGCCTTGC CGTGCTCGCCATCGTGGCCATCGTCAGCTTCCTGCTGGCGCGTGAACGTGACAGCGTCGAGCTGTCAGCCATTCGCTCGTCAAGCAACATTGTCCAGCTG ATCGAAAGCGACATCCTGCGCAACGCCGAACTCTACGACCAGTCACTGCAGGGCCTGATCTGGGCCGTCGGGCGCAAAGAGCTGCCGGAAATACCCGGCC
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| Amino Acid Sequence |
>porin
MPSAFRFTPLFIALTATIPVAAQADEDKADGFIEGSSFNLHFRNAYFNRDNHNAGVRDTREWGQGAVARFESGYTPGVIGFGLDAHAMLGLKLDGGGGHA GTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHRRIDTYY GSLDEHDKSKHLNWAGASWSGTENITSNLYAAELKDIWNQYYADFDYTYVVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQ RVNGNTPFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYDYDFAGVGVPGLTTSLSYSRGEADLTKATQDTSHYDYYREDGKNAMHWERDLDVKYVFQE GDLKDLSVLVRYATHRGSQGYASIDSNSDNDEVRVIVDYPLNVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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