Pseudomonas putida H8234, L483_00300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pput02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 555 573 3.5E-19
SMART SM00091 pas_2 IPR000014 PAS domain 256 321 5.6E-6
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 488 592 4.2E-24
SMART SM00304 HAMP_11 IPR003660 HAMP domain 193 245 7.5E-11
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 249 365 4.36E-14
Gene3D G3DSA:3.30.450.20 PAS domain - - 244 365 1.3E-20
Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 41 155 2.0E-36
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 524 538 3.5E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 579 592 3.5E-19
Pfam PF00672 HAMP domain IPR003660 HAMP domain 191 241 1.1E-9
CDD cd00130 PAS IPR000014 PAS domain 265 364 5.65974E-6
CDD cd00075 HATPase - - 492 591 1.67343E-34
CDD cd06225 HAMP - - 197 240 1.70482E-8
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 430 593 3.93E-47
Gene3D G3DSA:1.10.8.500 HAMP domain in histidine kinase - - 192 243 2.3E-7
FunFam G3DSA:3.30.565.10:FF:000006 Sensor histidine kinase WalK - - 446 593 3.5E-39
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 542 552 3.5E-19
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 446 593 1.2E-46
PANTHER PTHR44936 SENSOR PROTEIN CREC - - 6 592 8.6E-88
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 373 441 8.6E-17
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 358 441 4.71E-17
Gene3D G3DSA:1.10.287.130 - - - 366 439 6.4E-17
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 487 593 4.4E-31
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 255 371 1.6E-8
SUPERFAMILY SSF158472 HAMP domain-like - - 193 242 9.42E-8
Gene3D G3DSA:1.20.120.880 Histidine kinase (KinB), sensor domain IPR038320 KinB, N-terminal domain superfamily 39 166 2.3E-35
Pfam PF08448 PAS fold IPR013656 PAS fold-4 262 368 8.1E-14
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 374 441 4.3E-13
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 371 437 4.75686E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.