Pseudomonas aeruginosa 62, P997_05288
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCTCAGCGCCCACCATCGCGCCATGCATGCGCTGTACAGCGAGCACCATGGCTGGTTGCAGAACTGGTTGCGCGGCAAGCTGGGCTGCGCGGCGGACG CGGCGGACCTGGCTCAGGACACCTTCCTGCGCATCCTGCTCAAGCGCGAACTGCGCGAGATCGGCATGCCGCGCGCGTTCCTGCGGACCATCGCCCGCGG CCTGGTGATCGACCACTGGCGTCGCGAGGAACTGCAGCGCGCCTACCTCGAAAGCATCGCCCACCTGCCCGAGGCACAGGCGCCGTCGCCCGAGGCGCGG GAACTGGTGCTGGAACTGCTGGAGGAAATCTCGCGGATGCTCGACGGGCTCAAGCCGAAGGTCCGCACCGCCTTCCTCCTGGCCCAGTGCGAAGACCTCA GCCACCGGCAGATCGCCGAACGCATGGGGGTTTCCCAGCGTAGCGTCGAGCGCTACGTGGCCGAGGCGCTGTACCACTGCTACCTGCTGCGCTACGGCGA
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| DNA Sequence for Gene |
>P997_05288
ATGAGCGGAGCCGTGGACGGGACGAGCGGTAGGGTCGACGAAGCGGTGGTCAGGCAGGCCATCCACTGGCTGGTCCGCCTGCGCTCGCAGCCGGCCGACG ATCGCCTGCAGCGCGCCTGCGCGGCCTGGCGCGCGGAGCACGGCGAGCACGAGCGGGCCTGGCAGCAGGTCAGCGCGCTCAACGAAGAACTGCAAGGACG CTTCAAGGCGCTGCCCGGCGGGGTCGCCTACGGCACCCTGGACAGCAGCGCACAGCGCCTGCAGCGGCGCCAGGCGCTGAAACTGCTGTCGCTGCTGGTG GCCGGCGGCGCCGTGGCCTGGGTCGGTCGCGATAGCCTGCCCTGGCAGCGCCTGAGCGCCGACTACAGCACCGCCACCGGCGAGCGGCGCAGTATCGAGC TGGTCGACGGCACCCGCCTGCAACTGAACACCGACAGCGCGGTCGACGTGCGCTACGACGCCGGCCAGCGCCTGATCCTCCTCGCCCGCGGCGAGATCTT CCTCGCCAGCGGCGCCGATACGCAATCGCCCACGCACAGGCCGCTGCGGGTACGTACCGCGCAAGGGCTGTTCGAGGCCCTCGGCACCCGTTTCAACGTA CGCCTGCAAGATGCCGCCACCTGTCTCAGCGTCAGCGAGGGTTCGGTGCGCATCGATGCCTTCGGCGCGCGTCCGCTGCAGGCTCCGGTGGCCGAGGCGG GGCAGAGCTATCGGATCGCCGCCGACGGCGTGCGGCGCCTCGAACGGCCGCAGATGGACGCCGTGGCCTGGGCCGATGGCCTCATCGTCACCCGCGACAT GCGCCTGGCCGATTTCCTCGCCGAGGTCGCCCGCTACCGCAACGGCTACCTCGGCTGCGCCGCGGAGGTCGCCGACCTGCGCCTGTCCGGGGTCTATCGC CTGGACGACACCGACAAGCTGCTGCAGGTGCTCGCGCGGACCCTGCCGGTGCGCCTGCAGCTACATACCCGCTGGTGGGTGAGGGTGGTCGCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGCGCCGGCGGCCGCGTGGACGCTTGCTTTCGTCCGGAGCGAAACGCACTGAAAATTATTTTCATTATTTTTGTCGGCTTTCCGCGACTGGTCCGGCT TTACCGATTGAACACCCTTCAACGACTCCAACGGATCCCGTTCATGACCGCCACCGCCGTCGTCCTCCGCAATGCCCCGTCGTCCCTCGATTTCCCCCGC GCCTCGCGCCTGAGCCGTTCGGTGCGCGCGGCCCTGCTGTCGTTGGCCATGGCGGCCGGCGCGGCGCCGCTCTGCGCCTCGGCCGCCGAAGCGGCGGCGG AACAGGCGCGGCCCTATGCGATCCCCGCCGGACAGTTGGGCGACGTGCTCAACCGCTTCGCCCGCGAAGCCGGCATCACCCTCTCGGCCACTCCGGCGCA GACCGGTGGCTACAGCTCCCAGGGGTTGCGCGGCAGTTTCACCGTGCAGCAGGGCCTGGCCCGGCTGCTCGCCGACACCCCGCTGGAAGCGGAAGACCAG
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| Amino Acid Sequence |
>transmembrane sensor
MSGAVDGTSGRVDEAVVRQAIHWLVRLRSQPADDRLQRACAAWRAEHGEHERAWQQVSALNEELQGRFKALPGGVAYGTLDSSAQRLQRRQALKLLSLLV AGGAVAWVGRDSLPWQRLSADYSTATGERRSIELVDGTRLQLNTDSAVDVRYDAGQRLILLARGEIFLASGADTQSPTHRPLRVRTAQGLFEALGTRFNV RLQDAATCLSVSEGSVRIDAFGARPLQAPVAEAGQSYRIAADGVRRLERPQMDAVAWADGLIVTRDMRLADFLAEVARYRNGYLGCAAEVADLRLSGVYR LDDTDKLLQVLARTLPVRLQLHTRWWVRVVAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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