Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGCCTGTTTCGAAAGCGGCTGGGACCCGGCGCGGCTACCCTGCCGCTTGGGCGTCGACTGTCGCGTCGAGGTACACCTGGACAGCCTGGCCCAGGCCA TGGAAAACCTCCTGCGCAACGCCATCCGTCACTCGCCCGAGGACGGCACGGTCAGCCTCGACGGCGAGCGCGAGGGCGACTTCTGGCACCTGCGCCTGCA GGACCAGGGCCCTGGCGTGGCGGAAGACCAGTTGGAACGCATCTTCCTCCCCTACCAGCGCCTGGACGATAGCGCCGGCGAAGGTTTCGGCCTCGGCCTG GCGATCGCCCGGCGCGCCATCGAGCTACAGGGCGGCCGGCTCTGGGCCAGCAACGGCAAGCCCGGATTGTGCCTGCACCTGTGGCTGCCGGCGGCCGCCT GAGGGCGAAGTGTTTAGAAAGTTAATGCGCTTTACTCTCAAATAACAATCAATATCATTCGTGATCTCTTGCATTTCGCTGCATTGCCCGGAGATCACCG
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DNA Sequence for Gene |
>P997_05056
ATGTCCTCACGCGCCCTTCCCGCCGTTCCCTTCCTGCTGCTGTCCAGTTGCCTGCTCGCCAACGCCGTACACGCCGCCGGCCAGGGCGACGGCTCCGTCA TCGAGCTGGGCGAGCAGACCGTGGTCGCCACCGCCCAGGAGGAAACCAAGCAGGCGCCGGGGGTTTCCATCATCACCGCCGAGGACATCGCCAAGCGACC GCCGAGCAACGACCTGTCGCAGATCATCCGGACCATGCCGGGGGTCAACCTGACCGGCAACAGCTCCAGCGGCCAGCGTGGCAACAACCGGCAGATCGAC ATCCGCGGCATGGGCCCGGAGAACACCCTGATCCTGGTCGACGGCAAGCCGGTCAGCTCGCGCAACTCGGTGCGCTACGGCTGGCGCGGCGAGCGCGACA GCCGCGGCGACACCAACTGGGTGCCGGCCGACCAGGTCGAGCGCATCGAAGTGATCCGCGGCCCGGCGGCGGCGCGCTACGGCAACGGCGCGGCGGGCGG CGTGGTGAACATCATCACCAAGCAGGCCGGCGCGGAAACCCACGGTAATCTCAGCGTCTACAGCAATTTCCCGCAACACAAGGCCGAAGGCGCCAGCGAA CGGATGAGCTTCGGTCTCAACGGGCCGCTCACGGAAAACCTCAGCTACCGCGTCTACGGCAACATCGCCAAGACCGACTCGGACGACTGGGACATCAACG CCGGCCACGAATCCAACCGCACCGGCAAGCAGGCCGGCACCCTCCCCGCCGGTCGCGAAGGCGTGCGCAACAAGGACATCGACGGGCTGCTCAGCTGGCG CCTGACGCCCGAGCAGACCCTCGAGTTCGAGGCCGGCTTCAGCCGCCAGGGCAACATCTACACCGGCGACACGCAGAACACCAACAGCAACAACTACGTG AAGCAGATGCTCGGCCACGAGACCAACCGCATGTACCGCGAGACCTACTCGGTCACCCATCGCGGCGAATGGGACTTCGGCAGCTCGCTGGCCTACCTGC AGTACGAGAAGACCCGCAACAGCCGGATCAACGAAGGCCTGGCCGGCGGCACCGAAGGTATCTTCGACCCCAACAACGCCGGCTTCTACACCGCCACCCT GCGCGACCTGACCGCCCACGGCGAGGTCAACCTGCCGCTGCACCTGGGCTACGAGCAGACCCTGACCCTCGGCAGCGAGTGGACCGAGCAGAAGCTCGAC GACCCCAGCTCCAACACCCAGAACACCGAGGAAGGCGGCTCGATCCCCGGTCTCGCCGGAAAGAACCGCAGCAGCAGTTCCTCAGCGCGGATCTTCTCGC TGTTCGCCGAGGACAACATCGAGCTGATGCCCGGCACCATGCTCACCCCAGGCCTGCGCTGGGACCACCACGACATCGTCGGCGACAACTGGAGCCCATC GCTGAACCTGTCCCACGCGCTCACCGAGCGGGTCACCCTGAAGGCCGGTATCGCCCGCGCCTACAAGGCCCCCAACCTGTACCAGCTGAACCCCGACTAC CTGCTCTACAGCCGTGGCCAGGGTTGCTACGGGCAAAGCACCAGTTGCTACCTGCGCGGCAACGACGGCCTCAAGGCCGAGACCAGCGTGAACAAGGAAC TGGGCATCGAGTACAGCCACGACGGCCTGGTAGCGGGGCTGACCTACTTCCGCAACGACTACAAGAACAAGATCGAATCCGGCCTGTCACCGGTCGACCA CGCCAGCGGCGGCAAGGGCGACTACGCCAACGCGGCGATCTACCAGTGGGAGAACGTGCCCAAGGCGGTGGTCGAGGGCCTCGAAGGTACCCTGACCCTG CCCCTGGCCGACGGCCTGAAGTGGAGCAACAACTTCACCTACATGCTGCAATCGAAGAACAAGGAAACCGGCGACGTGCTCTCGGTGACGCCGCGCTACA CCCTCAACTCGATGCTCGACTGGCAGGCCACCGACGACCTCTCGCTGCAAGCCACGGTCACCTGGTACGGCAAGCAGAAGCCGAAGAAATACGACTATCA CGGCGACCGTGTCACCGGCAGCGCCAACGACCAGCTCTCGCCCTACGCCATCGCCGGCCTTGGCGGCACCTATCGGTTGAGCAAGAACCTGAGCCTCGGC GCCGGCGTCGACAACCTGTTCGACAAGCGCCTGTTCCGCGCCGGCAATGCCCAGGGCGTGGTCGGCATCGACGGGGCCGGCGCGGCGACCTACAACGAGC CCGGACGGACCTTCTATACCAGCCTGACCGCGTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCATAACGAGAAAGCCTGATGAGAACCTCCCTGCTCGTCGCCGCCCTGGGCCTCGCCCTGGCGGCGGCCCTGCCCGGCGGCGCGCCGCTGGCGCAACCG GACCCCGAGGCGACCATGGACCGCAGCCTGCTGCAACGCCAGGACCTGCCCTATCGCTTCAGCGCCGTGGACCTGGATTCCGTCGATGGCCAGCGGCATT ACCGGCTGTGGCTCGGCCGACCGCTGCAGGCACCGCCCGCCGCCGGCTACCCGGTGGTCTGGATGCTCGACGGCAACGCCGCCGTCGGCGCCCTCGACGA GTCAACCCTGAGACGCCTGGCCGACGGCGACGCACCGCTGCTGGTCGCCATCGGCTACCGCACGCCGCTGCGCATCGACCGCGCCGGGCGTACCTTCGAC TACACCCCCGCGAGTCCCGGCCAGGCCGATCAGCGCGACCCGCTCAACGGCCTGCCCAGCGGTGGCGCCGACGCCTTCCTCGACCTGCTGCGCGACGGCA
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Amino Acid Sequence |
>outer membrane receptor FepA
MSSRALPAVPFLLLSSCLLANAVHAAGQGDGSVIELGEQTVVATAQEETKQAPGVSIITAEDIAKRPPSNDLSQIIRTMPGVNLTGNSSSGQRGNNRQID IRGMGPENTLILVDGKPVSSRNSVRYGWRGERDSRGDTNWVPADQVERIEVIRGPAAARYGNGAAGGVVNIITKQAGAETHGNLSVYSNFPQHKAEGASE RMSFGLNGPLTENLSYRVYGNIAKTDSDDWDINAGHESNRTGKQAGTLPAGREGVRNKDIDGLLSWRLTPEQTLEFEAGFSRQGNIYTGDTQNTNSNNYV KQMLGHETNRMYRETYSVTHRGEWDFGSSLAYLQYEKTRNSRINEGLAGGTEGIFDPNNAGFYTATLRDLTAHGEVNLPLHLGYEQTLTLGSEWTEQKLD DPSSNTQNTEEGGSIPGLAGKNRSSSSSARIFSLFAEDNIELMPGTMLTPGLRWDHHDIVGDNWSPSLNLSHALTERVTLKAGIARAYKAPNLYQLNPDY LLYSRGQGCYGQSTSCYLRGNDGLKAETSVNKELGIEYSHDGLVAGLTYFRNDYKNKIESGLSPVDHASGGKGDYANAAIYQWENVPKAVVEGLEGTLTL PLADGLKWSNNFTYMLQSKNKETGDVLSVTPRYTLNSMLDWQATDDLSLQATVTWYGKQKPKKYDYHGDRVTGSANDQLSPYAIAGLGGTYRLSKNLSLG AGVDNLFDKRLFRAGNAQGVVGIDGAGAATYNEPGRTFYTSLTASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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