Pseudomonas aeruginosa 62, P997_03563
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCCGTCGGCCAGGGCGCCGACGGTGATCCATCCGGAATGCGAGTGGGCGGACATAGGGTTCTCCTCGTCGTGGGAAACCCATGCTGGCCTGTCTTCG AGTATCCCGATATCGACCGGATGGTTGATAGGTCGATATGCCACGGAAATAGTACGGAGCGGCGAAGGGAAAGTTATCGAAGATGAAGTCTTAGATGAGT TTTCGTTTCTTCTTTTTTTGTTTTTTAGTTAATGGGTTCCTGTTCTTCTATAAGTATTTTCTGAATTTATTCTTATGTACCTATTGGCTGTTATCGGAAA TGGACTACATATGTTTTCGTATGATTATTATTTTTAAATCCTGTCTTTCTTTCTAGTATTTGGGTCTGCGTTTATCAGGGCGCAATCTTCGGCTGTCGCG TAATGGTCGGAGGCGCTCTAGGCGGCCGTCCCGGTTGCGCGCAAAGGCTTGGCTACCTTGGCCGGTTCGTACTGCATCGGCTCTTCAGGGAGCAGCCAGG
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| DNA Sequence for Gene |
>P997_03563
ATGTTCCACAACTCCAAAGGAAATCAGATGAACAAGTTCAAACGTGCAATTCTTGCGCCCCTCGTTGCGTCGGGCACCCTTCTCGCGCTGATGTCCCCCG TGGCCCATGCGGTCGATGGGATCGTCAACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGTCAGGCGCCGGGTGCGGGCAACGTCACCAA CGTCGACCTGGGTATCGTGGCGCCGACCCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGACCTGGTCCTCTCCGGTGCCGGCTGCACC AATGACAAGAAGGTTTCCATCGCCTTCGATACGACCAACGTCGACCGTATCAGCGGCAACCTGATGCTGATGGGGCCGTTGAAAGCCAAGGGCGTGCAGA TCCAGATCTTCAACAATTCGGCGGCCAACACCACGAAGATCCCGCTGGGCTTGGTCGAGGCCGCCCCGCAGAAGGCAACCATCGACAAGAACACGGCGAC CCTGAAGTACAAGGCCTCCTATGTGTCCACCGAGAAGACCGTGATCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGGTCGACGGACGAAGAGGTGAGGCCATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGCCG GAACGGCTCATGCCGGGCTGATCGCACAGGGCACTCGTGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACGTCCGGCACTCC CGTGCTGGCGCAAGCCTGGATCGACGATGGCCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTCCCCTTCAGCGTCACGCCGGCCGTGACGCGAGTGGAC CCCAATGGCGGCGCCGTATTGCGCATCGCCTACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCA GGGACGAAGACGAAAACAATGCATTGCAGTTTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGG
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| Amino Acid Sequence |
>fimbrial subunit CupB1
MFHNSKGNQMNKFKRAILAPLVASGTLLALMSPVAHAVDGIVNFSGNITDVACDINGQAPGAGNVTNVDLGIVAPTHFTAVGTNSTFQEFDLVLSGAGCT NDKKVSIAFDTTNVDRISGNLMLMGPLKAKGVQIQIFNNSAANTTKIPLGLVEAAPQKATIDKNTATLKYKASYVSTEKTVIAGTGLSHIRYLLAYE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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