Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGAAGAACAGGTTCGGCTCGCCGAGCTTCATGAAGTCGTCCTTCGACTGCCAGTCCGGCTGGGCGATGATGCCGACGCGGAACCCCTGGGCCTCCAGC AGGCGGCCGATGATGGCCATGCCGAAGGACGGGTGGTCGACGTAGGCATCGCCGGTGACGATGATGATGTCGCAGGAGTCCCAGCCGAGCTGATCCATCT CTTCCCTACTCATAGGCAGGAAGGGCGCCGGACCGAAACACTCGGCCCAGTACTTGGGATAGTCGAACAGCGGCTTGGCGGCTTGCATCACGGGCACCAG GGGGTATCTCTAGGAATGGGGGGTCGCGAAAACGCGGGCGCGGAATATAGCACAAAAAATGAGCAATTCCGACGTTTTCACTGGGTATTGCCTGCCGTCG GCCGGCTTCGAAAAAATGCCATCATTTCGCCACCTTGTTTCTATACTCCATTCATCGTCATCTCACCCGGCCTCTAAGGCAGGCCCCCGGGAGAGTCATC
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DNA Sequence for Gene |
>P997_02701
GTGCGCCATCCTCTTGCCCTGCTCGCGGTCATCTTCCTGCTACTGGCCAGCGCCGTTTCGCGCGCCGCGCCGGAGTTTCCAGCGCCCCCGGCCAGCGGCG CCTGGTTGAACGGCTCGCTGGACCTGCTCGAAGACCCCGATGGCAACCTGGCGGTGGAGGACCTCGAACAAGCGGAGCAGGCCGGCCGCTTCGTCGCCGC CGCCGGCCGCACCAGCGTCGGCCTCAGCCGCAGCGCCTGGTGGCTGCGCCTCGACCTGCCGAGACGCGAGGCGGTATCCGGCGGCTGGTGGCTGGAAGTC GCCAGCGCCAGCCTGCACGACCTGCGCCTGTACCTCCCCGACGAGCGCGGCGGGTTCCGTGAACATCGCAGCGGCGAAGCGGTGCCCTTCGCCGAGGGCC GCGACCACGCCTATCGTCATCCGCTGTTCCGGATCCCTCCCGGCGATGGGCCGTTGCGCGTCTACCTGCGCAGCTACGATCCCGGCGGCAACGCCTTTCC GCTGAGGCTCTGGAGCCACGACGAACTGCTGGAATACCGCAGCCAGGGCAACCTGCTGTTCGGCATGGCCTACGGGCTGATCCTCGCCCTGCTGCTGTAC AACCTGTTCCTCTTCACCAGCCTGCGCGATCGCGCCTATTTCTGGTACGTGCTGACCGCTGCCAGCGCGCTGGTGCTGACCCTGAGCATCAGCGGCCATG GTTTCGAGTATTTCTGGCCCGAGCGGGCGGTGCCCTGGTGGCTTGACCGCCTGGCGCTGCTGGCGATCTGGGGCATCTGCGTGATCCGCTTCAGCCAGAA CCTGCTGCAAAGCCGGCAGCACGCACGCTGGGCCCATCACCTGCTGAACGCCTGTTGCCTGCTGTTCCTTGCCTGCCTGGCGTTCAACGCCGCCGGCTGG CGCTGGCAGGCGGCCGGCGTGCTGGCGCTGACCCTGCTGGCCAACCTGCCGATCGCCATCGGCCTGGCAGTGCAGCGCTGGCGCCAGGGTTCGGCCACGG CGCGCCTGTACCTGGTCGGCTTCGGCCTGGTGCTCGGCAGCGTCAGCCTTGGCGTGATGCGCGCCACCGCGCTGGTCCAGCCGACCTCGGCCAACGCCAT GGTCTTCCCGCTGGCGCTGACCCTGGAGGCCCTGCTGTTCTCCCTGGCGCTCGCCTCGCGCATCCAGGATCTGAAGCAGGAAAGGGCCCTGGCCCTGGAC CAGGCCGACCAGGCCGACCAGGAAAAGAACGCGCGCCTGGCCCTGCTGCACAGCGCCCAGCGCGACCTGGCACGCGCCGTGGAAGTCCGTACCAACGAGT TGAGCGAGGCCAATCGCCAGTTGCAGATGCGCGAAGCGCAACTGCAGTACGCCGCCCATCACGACCCGCTGACCGGGCTTGGCAACCGCAGGCACCTGAT GGAGTTCGCCGAAAGCGCCCTGGACGACGCGCGCCGCCACGGCAACAGCATGGCGCTGCTGCTGATCGACCTGGATCACTTCAAGCCGATCAACGATACC CATGGCCACGATGCCGGCGACTTCGTCCTGCAGAACGTGGCCCAGCGGCTGCGCCATTGCGTGCGCACCGAGGATTGCGTGGCGCGCCTCGGCGGCGACG AATTCGCCGTGCTGGTCGGCGGGTCGAATGCCGAGCAGCATGCCCGCGACATCGCCGAACGCCTGCTGCGAGAACTGGCGAAACCGGTGGAGTTCGCCAA GCAGTGGCTGGTGATCACACCGAGCATCGGCGTCGCCCTGTTTCCCGGCGACGCCCTGCAGTTCGGCAAACTCTACAAGGCCGCCGACCAGGCGCTGTAC CGGGTCAAGGGCGCCGGGCGCGCCGGCTATGCGATGGCTGCCGACGATGAACGCGAGACCGCGCCGGCGCTCCCCTGGCCGACCGCCCTGGCACCGGAGC GTATCTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCAGTGGCTGTAGCGTCGCGGAACCCGAGCCGTGACCTTGCTCAGAAGCTCGTAGCCAAGGGTGCCGCAGGCACGGGCGACCTCGTCCACCGACAACCC GGCGCCCCACAACTCCACCGGGTCGCCAACGCGAGCCTCCGGCAGGTCGGAGAGGTCGACCGCCAGCATGTCCATCGAGACCCGCCCGGCCAGGGTCGCG CGGCGTCCCCCGACCAGTACCGGAGTCCCGGCTGGCGCGGTACGCGGATAGCCGTCGGCGTAGCCGCAACTGACCGTGCCGATCCGCGCCGGCCGCTCGG CGATCCAGGTGGCGCCGTAGCCGACGCTCTCGCCCACGGCCACCTCGCGCAGTGAAATCAACTGCGCGCCCAGGCTCATGGCCGGCCTCAGGCCCAGTTC GGCGGCGCTCAGGTCGGCCAGCGGGGTCGACCCGTAGAGCATGATTCCCGGCCGCAGCCAGTCCATGTGGGCGGCCGGGATAGTCAGCACCGCCGCCGAA
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Amino Acid Sequence |
>hypothetical protein
MRHPLALLAVIFLLLASAVSRAAPEFPAPPASGAWLNGSLDLLEDPDGNLAVEDLEQAEQAGRFVAAAGRTSVGLSRSAWWLRLDLPRREAVSGGWWLEV ASASLHDLRLYLPDERGGFREHRSGEAVPFAEGRDHAYRHPLFRIPPGDGPLRVYLRSYDPGGNAFPLRLWSHDELLEYRSQGNLLFGMAYGLILALLLY NLFLFTSLRDRAYFWYVLTAASALVLTLSISGHGFEYFWPERAVPWWLDRLALLAIWGICVIRFSQNLLQSRQHARWAHHLLNACCLLFLACLAFNAAGW RWQAAGVLALTLLANLPIAIGLAVQRWRQGSATARLYLVGFGLVLGSVSLGVMRATALVQPTSANAMVFPLALTLEALLFSLALASRIQDLKQERALALD QADQADQEKNARLALLHSAQRDLARAVEVRTNELSEANRQLQMREAQLQYAAHHDPLTGLGNRRHLMEFAESALDDARRHGNSMALLLIDLDHFKPINDT HGHDAGDFVLQNVAQRLRHCVRTEDCVARLGGDEFAVLVGGSNAEQHARDIAERLLRELAKPVEFAKQWLVITPSIGVALFPGDALQFGKLYKAADQALY RVKGAGRAGYAMAADDERETAPALPWPTALAPERIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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