Pseudomonas aeruginosa 62, P997_02029
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAATACAAGGAGTTCGGCATCCGCCTGACCCTCACCCCGACGGTGATGAACAACCGCCGCATCGCTCTCAAGGTGGCGCCGGAGGTCAGCGAACTGGA CTACAGCGCCGGCATCCAGAGCGGCGGGGTGGCGGTGCCGGCACTGCGCGTCCGGCGCACCGACACCAGCGTGATGCTGGCCGATGGCGAGAGTTTCGTG ATCAGCGGGCTGACCAGCAGCAACTCGGTGAGCAACGTCGACAAGTTTCCCTGGCTGGGCGACATCCCGATCCTCGGTGCGTTCTTCCGCTCGACCAAGC TGGACAAGGACGACCGCGAGCTGCTGATGATCGTCACCCCGCACCTGGTCCAGCCGCTGGCCGCCGACGCACAGTTGCCGGACCTGCCCGGCGAGGGCTT GCGGCACTACGATCCGGGGTTCTCGCGCCTGTACTTCCTCGAGCGCGGCGAGTACGACGGCCAGCAGAACGACACCGGCCTGTCGGATTAGGAGGCGCGC
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| DNA Sequence for Gene |
>P997_02029
ATGAACCAGAACTTCGTGGCGCTGACCCAGCATCCCGGCGAACTCGACTGGTTGCAGAACAGCCTGGCGTCCGCCGGCCAGGTGGTACCGGCAGGCAGCG CCAGCCTGGAGGAGTTGCTGGCGCTGCTCGACGTCACCGCCGCCGGGGTGCTGTTCATCAGCCTCGGCAAGAGCAACCTGGTGTCCCAGGGCGCGCTGGT CGAGGGATTGGTATCGGCGCGACCGATGCTCTCGGTGGTGGCCATCGGCGACGGCCTGGACAACCAGTTGGTGCTGGCGGCGATGCGCGCCGGCGCGCGC GACTTCATCACCTACGGCGCCCGCGCCAGCGAGCTGACCGGGCTGATCCGGCGCCTCGGCGGACGCCTGCCCAGCGTGCCGGTGAGCGCGGCGCGCCAGG GCGAGCTGCTGACCCTGGTCAGCGCCCGACCGGACGCCGACGGCGCCTTCGTCGCCTTGCACCTGGCCAAGGCGTTGCAGGAGCAGACGCCGAACCAGGT CCTGCTGCTGGACGTCGGCCAGCCCACCGGCGAGGCGCTGGCGATCCTCGGCCTGGACTCGGCCTTCACCTTCAGCGACGCCTTGCGCAACCTGCGGCGC CTCGACCAGACCCTGATCGACAGCGCCTTCACCCGCCTCGACAGCGGCCTGCGGATACTCAGCCTGACCGACGAGCCCGGCGTGCTGGAGCGAGTCACCA CCGCCGAACTCTATCTGTTGCTGGGCAACCTGCGCGGGGCGTTCAGCCATGTGGTGGTCAACCTCACCGGGCTGCCCGAGGGCGAGCTGAGCAACCAGTT GCTGGTGCAGGCCAACCGCGTGCTGTGGATGGTCGACCAGAGCGTGCCGTCCTGCAAGAAGGGTCTGGAGCGCCTGCGCCGCCTGCGCGAGCGCAACCTG CCGTTGCCCTCCATCGAGTTGCTGATCGAGCGCTACCTGCCCAATGTGGCGCCGGACCAGCAGGCCCTCAGCCGGATGTTCGACCTCGATCTGTTCGGCG TCCTGCCGTTGTCCCCGGAATCGCGCCTGCGCGCGAAGAACCTCGGCAAGAGCCTGTTCGAGGTGGCGCCGCGCGACCCATTGGCGGCCAAGCTGCGGCA ACTGGCGGACAGCCTGTGCGTGACACGCGGCGAGCGCCGTTCGCTGCTGTCCTGGCTCGGCCGGGCCAAGGCGGCGCTGCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACGGGATTCGGCGCGCGTCCTGACGGCGGTGCCTTCCACTACCGCCAGGAGCAGGACATCCAGGCGCTGAAGCTGCGCCTGCACCGCTACATCATCGA CGAGATCGACGAAGACGGCATGAACCTGCTGGAGGGCGCGCGCTCCGCCGTGGTCCAGTACGTCTCGGAAAAGGTCTGCGAATACGGCTCGCGCCATCAA CTGGCGATCTCCCGCTACGAACTGGACCGCCTGGCCGAAGAGGTGGTCGACGAACTCACCGGCTTCGGCCCGCTGGAGATCCTCCTGCGCGATCCCGGCG TCTCGGAAATCCTCGTCAACGGACCGGGCCGGGTGTTCGTCGAGCGGGAAGGGCGGCTCTACCAGAGCGACCTGCGCTTCATCGACGACCACCATGTGCT GCGGGTGATCCAGCGTATCCTCGCGCCCCTCGGCCGACGCCTGGACGAGTCCAGCCCGATGGTCGACGCGCGCCTGCCGGACGGCAGCCGGGTCAACGCG
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| Amino Acid Sequence |
>putative pilus assembly protein
MNQNFVALTQHPGELDWLQNSLASAGQVVPAGSASLEELLALLDVTAAGVLFISLGKSNLVSQGALVEGLVSARPMLSVVAIGDGLDNQLVLAAMRAGAR DFITYGARASELTGLIRRLGGRLPSVPVSAARQGELLTLVSARPDADGAFVALHLAKALQEQTPNQVLLLDVGQPTGEALAILGLDSAFTFSDALRNLRR LDQTLIDSAFTRLDSGLRILSLTDEPGVLERVTTAELYLLLGNLRGAFSHVVVNLTGLPEGELSNQLLVQANRVLWMVDQSVPSCKKGLERLRRLRERNL PLPSIELLIERYLPNVAPDQQALSRMFDLDLFGVLPLSPESRLRAKNLGKSLFEVAPRDPLAAKLRQLADSLCVTRGERRSLLSWLGRAKAALL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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