Pseudomonas aeruginosa 62, P997_01261

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCCAGCCCGCTGGCCGGCAGCGAACGCGGCGAGCTGGCCGGCGCCGCGCTGGTGCAGTTGCAGGCCACCTGGCGGCAGTGGTGCCGCAGCCATGCTCC GGCCGGGACGGCGCTGCGCGCGGACCCGCTCCCCGGAGCCGGGCGCTAGTTCTGCGGTGGCCGGCCACATTGACCGCGCAAGCCCCGAACCACTAAGCTG CGCGCCTTGCGACAGGTGCCCCGCAAGGGGTGAAACAGGGAAGCTGGTGCGTTCCGTCGGAACCAGGCCAGCGCTGCCCCCGCAACGGTAGGCGAATCAG ACAGCCGCTCGATGACCACTGTGCTCCGGCATGGGAAGGCGCGGCTGGAAGCGTCCAGCGCTTCGCTCGCGAGCCCGGAGACCGGCCTGACGCACCCACG GCATCGCGGAGGGCGCTGTCGGACGTCTCCTGCCGTCGCTTCGTCCTCCGTCTGCCTCAACCCAGGTCGCGCGGGTGAGAGCGACGGAGCAGCGCAGAGC
DNA Sequence for Gene
>P997_01261
ATGAACAGAGTTTTCCTGACCCCGGCAGCCGTGGCGCTGTGCGGCGCGTCTTCCCTGAGCCTGGCCGAACCGGTCAGCCTTGCCGACCAGGTGGTGACCG CCACCCGTACCGCCCAGACCGCTTCCCAGAGCCTGGCGGCGGTGAGCGTCATCGACCGCGAGGATATCGAGCGCAGCCAGGCGCGCAGCGTGCCGGAGCT GTTGCGCCAGGTACCCGGCGTGTCGCTGGCGAACAACGGCGGTTTCGGCAAGAACACCACGCTGTTCCTGCGCGGCACCGAGTCCGACCATGTGCTGGTG CTGATCGACGGCATCAAGGTCGGCTCGGCCAGCGCTGGCCTCACCGCGTTCCAGGACTTGCCGGTGGAGCTGATCGAGCGCATCGAGGTGGTCCGCGGGC CGCGTTCCAGCCTGTACGGCTCGGAGGCCATCGGCGGGGTGATCCAGATCTTCACCCGGCGCGGCGACGGCCAGGGCGCCAAGCCGTTCTTCTCCGCCGG TTACGGCACCCATCAGACCCTGGAGGGCAGCGCCGGGGTCAGCGGCGGCGCCGGCAACGGCTGGTACAGCCTCGGGGTGAGCAGCTTCGATACGGCGGGG ATCAACACCAAGCGCGCCGGTACTGCGGGCTATGAGCCAGACCGAGACGGCTACCGCAACCTGTCCGGCAACCTGCGCGGCGGCTATCGCTTCGACAATG GCCTGGAACTCGACGGCACCCTGGTCAGGGCCAAGTCGCACAACGACTATGACCAGGTCCTCGGCAACTCTGGTTTCAATACCAACGCCGACGGCGAGCA GAACCTGGTCGGCGGCCGTGCCCGCTTCACTCCGCTCGATCCCTGGCTGGTGACCCTCCAGGCAGGGCGCAGCGAGGACAAGGCCGATGCCTATCAGGAT GGCCGTTTCTACTCGCGCTTCGATACCCGTCGCGACAGCCTGTCCTGGCAGAACGACCTGACCCTGGCCGAAGGCCATGTGCTGACCCTCGGCTACGACT GGCAGAAGGACGAGATCAGCAGCAGCGAAGCCTTCAGCGTCGACTCGCGGCTGAACAAAGGCTGGTTCGCCCAGTACCTCGGCCGGTACGGTCGCCAGGA TTGGCAACTGAGCCTGCGCCGCGACGACAACCAGCAGTTCGGCGTGCACGACACCGGCAGCGCCGCCTGGGGCTACGCGCTGAGCGACGCGCTGCGCTTC ACCGTCAGCTACGGGACGGCGTTCAAGGCGCCGACCTTCAACGAACTCTACCTCCCCGACTACGGCAATCCCGACCTGGACGCCGAGACTTCGCGCAGCC TGGAGGTCGGTCTCAGCGGTACGCACGACTGGGGGCACTGGGCGGTGAATGCCTATCGTACGGACATCGACTCGCTGATCACCTATACAACCCGTCAGGG GCTTTATGTGCCGTTCAACATCGACGAAGCGCGCATCCGTGGCGTCGAACTGGTCCTCGGCAGCCAGTGGCTGGGCTGGGACTGGAACGCCAACGCGACC TTCCTCGACCCGCAAAACCGTTCCGGCGGCGTCAACGACGGCAACGAACTGCCGCGCCGGGCGCAGCGGATGTTCAACCTGGAACTGGACCGGCGCTTCG AGCGTCTTTCGCTGGGCGCCAGCGTGCACGCCGAAGGCCGACGCTATGATGACCCGGCCAACGAGGTGCGCCTGGGCGGCTACGCCACCCTCGACCTGCG CAGCGAGTACCGGCTGAACGACGAATGGCGCCTGCAGGGCCGGATCGCCAACCTGTTCGGTGCCGACTACGAAACCGCGTATGGCTACAACCAGCCTGGC CAGGCGGTCTACCTCAGCGTGCGCTACCAGGCCCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCGGGTATTTCGAATGAACGAGGCGACGGCGCGGCCGCGTCGCCGCAAGGAGTGATCGACGATGAACGAATCCCCCGAGAAGGACCAGCGCCACCGCG AGCGGATGGAGCGCAAGAAGGCCGTGGTCGACGAGAAGATCGCCCAGGCCCGCGACGAACGCGGCGTGCTCCTGGTGCATAGCGGCAACGGCAAGGGCAA GAGCAGCTCGGCCTTCGGCATGGTCGCGCGGGCCCTGGGCCATGGCATGAAGGTCGGTGTCGTGCAGTTCATCAAGGGCGCCGCCAGCACCGGCGAGGAA GCCTTCTTCCGGCGCTTCCCCGAGGAAGTCAGCTATCACGTGATGGGCGAGGGCTTCACCTGGGAGACCCAGGACCGCCAGCGCGACATCGCCAAGGCCG AGGCGGCCTGGAAGGTCGCCGCGCAATTGCTGGCCGACCCGGACGTTGGCCTGGTGGTGCTGGACGAACTGAACATCGCCCTCAAGCACGGCTACCTGGA
Amino Acid Sequence
>ligand-gated channel protein
MNRVFLTPAAVALCGASSLSLAEPVSLADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTESDHVLV LIDGIKVGSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDGQGAKPFFSAGYGTHQTLEGSAGVSGGAGNGWYSLGVSSFDTAG INTKRAGTAGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLVRAKSHNDYDQVLGNSGFNTNADGEQNLVGGRARFTPLDPWLVTLQAGRSEDKADAYQD GRFYSRFDTRRDSLSWQNDLTLAEGHVLTLGYDWQKDEISSSEAFSVDSRLNKGWFAQYLGRYGRQDWQLSLRRDDNQQFGVHDTGSAAWGYALSDALRF TVSYGTAFKAPTFNELYLPDYGNPDLDAETSRSLEVGLSGTHDWGHWAVNAYRTDIDSLITYTTRQGLYVPFNIDEARIRGVELVLGSQWLGWDWNANAT FLDPQNRSGGVNDGNELPRRAQRMFNLELDRRFERLSLGASVHAEGRRYDDPANEVRLGGYATLDLRSEYRLNDEWRLQGRIANLFGADYETAYGYNQPG QAVYLSVRYQAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site