Strain | Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTCCAAGCGTACCGGTCCGGACCTGGCCCGCGTCGGTAGCCGCTACTCCGACGACTGGCACCGCGCACACCTGTTCAACCCGCGCAACGTGGTGCCC GAGTCGAAGATGCCGGCCTACCCGTGGCTGGTGGAGAACAAGCTCGACGGCAAGGACATCGAGAAGAAGCTCGAAGTGATGCGCACCCTCGGCGTGCCCT ATACCGACGAAGACATCAAGGGCGCCAAGGACTCGCTGAAAGGCAAGACCGAAATGGATGCCGTGGTCGCCTACCTGCAGGTGCTCGGCACCTCGATCAA GAACAAACGGTGACGGCAATGGATATCGGGACGCTGCGAGGACTCGGCACGCTGCTGATCATGGTCGCCTTCATCGGTCTGGTGATCTGGGCCTACAGCG GCAAACGCAAGAAGAGCTTTGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
|
|
DNA Sequence for Gene |
>P997_00996
ATGACCACCTTCTGGAGTCTGTACATCACAGCTCTTACCGTCGGTACCTTGATCGCCCTGCTCTGGCTGGTCTTCGCCACCCGCAAGGGCGAGGCCAAGG GTACTACCGAAAAGACCATGGGCCACTCCTACGACGGCATCGAGGAGTATGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTACATCGGCACCATCGT CTTCTCCGTCGGCTACCTGGTCCTGTACCCGGGCCTGGGTAACTGGAAAGGCGTGCTGCCGGGCTACGAGGGCGGCTGGACCCAGGACAAGCAGTGGGAA CGCGAGATGAACATCGCCCAGGAGAAGTACGGGCCGATCTTCGCCAAGTACGCCGCCATGCCCATCGAGGAAGTGGCCAAGGACGAGCACGCCATGAAGA TGGGCAGCCGCATGTTCGCCACCTACTGCTCGATCTGCCACGGTTCCGACGCCAAGGGCGCCCTCGGCTTCCCCAACCTGGCCGACAACGAGTGGCGCTG GGGCGGTGACCCGCAGAGCATCGAGACCACCATCCTCGGCGGTCGCCACGCGATCATGGCGGCCTGGGGCGACATCCTCGGCGAAGACGGGGTGAAGAAC GTCGCCGCCTACGTCCGCACCGAACTCGCAGGACTGAAGCTGCCGGAAGGCACCAAGGCCGACGTCGAGGCCGGCAAGCAGATCTTCTCGGTCAACTGCG TCGCCTGCCACGGCCCGGAAGGCAAGGGTACCGCCCTGGTCGGCGCGCCGAACCTGACCAACCCCGGCGCGTTCATCTACGGCTCCAGCTACGCCCAGCT CCAACAAACCATCCGCCATGGCCGCCAGGGCCAGATGCCGGCCCAGGAGCCCTACCTGGGCAAGGAAAAGGTGCACATCCTGGCCGCCTACATCTACAAC CTGTCGCACAACCAGGGCAGCAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCCTCCCCCCACCCGCGCCCTCCCGGGCGCGGGTCCTTCCCCCGGTCTCAGACCTTAGCCCCAGGCAGCGCGACGAAGTGTCGCACCAGCGGACGCCTT TCCTACCCATCCTTTTCAATCGCGTCTAAGCTGCTCTGCATTCGTCCCTCTCCGGCAGAGCGACGGGACACCTAACTTCACCGGCCGAACCCACTCGCCC GGATAGCGCCAGAAAGCCATACGGCCGCCTTGGAAAGCGCTCTGAAGCAGGCATCAAACTGGCGTCGCCCCTGGCCTGGCGCGTTGCAATGCCCACCCGC TTTCTCCATACTTGCCGCCGATTTTTTGTCCCTAAAAAAGTCCATTAACCGTGGAACCCCTAGCATGAGCACAGCAATCAGTCAGACTGCTTATAACTAT AAGGTGGTCCGCCAGTTCGCCGTTATGACGGTGGTCTGGGGGGTCATTGGAATGGGTCTCGGTGTCCTGATCGCCGCCCAACTGGTATGGCCCGAATTGA
|
|
Amino Acid Sequence |
>cytochrome CBB3
MTTFWSLYITALTVGTLIALLWLVFATRKGEAKGTTEKTMGHSYDGIEEYDNPLPKWWFMLYIGTIVFSVGYLVLYPGLGNWKGVLPGYEGGWTQDKQWE REMNIAQEKYGPIFAKYAAMPIEEVAKDEHAMKMGSRMFATYCSICHGSDAKGALGFPNLADNEWRWGGDPQSIETTILGGRHAIMAAWGDILGEDGVKN VAAYVRTELAGLKLPEGTKADVEAGKQIFSVNCVACHGPEGKGTALVGAPNLTNPGAFIYGSSYAQLQQTIRHGRQGQMPAQEPYLGKEKVHILAAYIYN LSHNQGSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|