Strain | Pseudomonas aeruginosa MSH3 genomic scaffold adgeF-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCTTCAGCAGCTTGGAGCCCAGCAGGCTCTTCAGCGAGCGCATCAGCCGGCCCTCGTAGCCCTCCAGGTACTCGCCGAGCGCCTGGCGGCCGTAGACCG GGCGGCGCTCCTCGACGTTGAAGAACACCACCGAGGGCAGGGTGATCTTGCCGTCCTCCAGCTCGATCAGCGGTTCGACCTCCGGCCGCCACCAGCCGAC GGTGGAGTTGGAGGTGCCAAAATCGATGCCCAGGGCGCGGGCGGCGGTGCTCGGGTTCATGGCGCGAAACGGTCCGGGAAAAAAACGGCCGCGCAGTGTA TGCGAGAGCGTCGTAGATTTCACCGCCGGCGATCGGCAGGAAGCGTCCTGGGACGTCCGTGCGGGCCGCCCCGACCTTTGTATACGGATTTGCCAAGGGG CCTGCGCATGGTGCTATGTTGGCGCTGCTTTCCCACTCCGTCTTGCCGTGTTGTCCTGGATTTCGCCATGCATAGAGCCTCACACCATGAGTTGCGTGCG
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DNA Sequence for Gene |
>P999_05263
ATGTTTCGCGCGCTGTTGGACTCCTCCCGTTGCTACCACACCGCTTCCGTGTTCGATCCCATGTCGGCGCGTATCGCCGCCGACCTCGGCTTCGAGTGCG GCATCCTCGGCGGTTCGGTGGCTTCCCTGCAGGTCCTGGCGGCGCCGGACTTCGCCCTGATCACCCTCAGCGAATTCGTCGAGCAGGCCACCCGCATCGG CCGGGTGGCGCGCCTGCCGGTGATCGCCGACGCCGACCACGGCTACGGCAACGCGCTGAACGTGATGCGTACGGTGGTCGAACTGGAGCGCGCCGGAATC GCCGCGCTGACCATCGAGGACACCCTGCTGCCGGCGCAGTTCGGGCGCAAGTCCACCGACCTGATCTGCGTCGAGGAAGGCGTCGGCAAGATCCGCGCGG CCCTGGAGGCGAGGGTCGACCCGGCGTTGACCATCATTGCCCGGACCAACGCCGAACTGATCGACGTCGATGCGGTGATCCAGCGCACCCTGGCCTACCA GGAAGCCGGCGCCGATGGTATCTGCCTGGTCGGCGTGCGCGACTTCGCCCACCTCGAGGCGATCGCCGAGCACCTGCACATCCCGCTGATGCTGGTCACC TACGGTAATCCGCAACTGCGCGACGACGCCCGCCTGGCGCGGCTCGGCGTGCGTGTCGTGGTCAACGGCCACGCCGCCTATTTCGCCGCGATCAAGGCGA CCTACGACTGCCTGCGCGAGGAGCGCGGTGCGGTGGCCTCGGACCTGACCGCCTCGGAGCTGTCGAAGAAGTACACCTTCCCCGAGGAATACCAGGCCTG GGCCCGCGACTACATGGAAGTCAAAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGATTTCAGGCCAGGCCCATGTTGCGCTGCCGCGCCTGCAGGTCGGCGGCGCCCGCCAATGCGCAGAAGGTCGCAGGGCGACAGTCTGGTTCAGGATCG CCCGGAGCGCTCGCGTCGCTTGCGTTCGCGGTAGGCGGCCTGGTTGGCCAGGCGCCGCTGCGCCGAACCGGGGCGGTTGGCCGACTGGGCGCGGTACAGG CGCTGGGCGTAGACCAGTTCCATGTAGCGTTGCATCGCCCGGCTGTTGAACAGCAGCCAGGCACAGGCGCCGCCGCCGAGCGCCACCAGGCCCGACGTCT CGCCGCTGGCCAGGCGCAGCAGGAGCCCGGTGGCGACCAGCAGCAGGCTGGCGTCGCGGGCCAGGCGCGGGCCGAGGCTGGCGCCACGGGAGAGCAGGGC GATCAGCCACAGCCAGGCCGCCAGCAGCGGCAGGGCGGAGAGCCAGCCCAGCGGCCGCAAAGGAGCCTCCGGCAATGCCAGGCGCAGCGCGGCAAGACCC
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Amino Acid Sequence |
>oxaloacetate decarboxylase
MFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGI AALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVT YGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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