Strain | Pseudomonas aeruginosa MSH3 genomic scaffold adgeF-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAGACCGCCAGCGCGGTGATGACCTTCGCCCTGCTGGCGTACATGCTGATGCAACCGCTGTTCGGCATGCTTTCCGATCGCATCGGGCGCAAGACCTCG ATGCTCTGGTTCGGCACCCTGGGCACGCTCTGCACCCTGCCGATCCTGCTCGCGCTGAAGACCGTGAGCAGTCCCTACATGGCCTTCTTCCTGATCATCC TGGCGCTGGCCATCGTCAGCCTGTACACCTCCATCAGCGGCCTGATCAAGGCCGAGATGTTCCCGCCGGAGGTGCGCGCCCTCGGCGTCGGAGTGTCCTA CGCGGTGGGCAACGCGATCTTCGGCGGCTCGGCCGAGTACGTCGCCCTGGGGCTGAAGTCGGTAGGGATGGAGAACGTCTTCTACTGGTATGTTTCAGCC ATGTGCCTGCTGGCGCTGCTGGTCTGCGTGAGCCTGCCGGACCTGCGCAAGGTCAGCTACCTGAACGACGAGCCCTGACGGGCCGGGAAAAGGAAAACCG
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DNA Sequence for Gene |
>P999_04838
ATGAGCGACGTACCCGCCAACCAGTTGTTCGATGCCTATTTCACGGCGGCGCCGATGCGCGCGGTGTTTTCCGACCGCGGCCGCCTGCAAGGCATGCTCG ACTTCGAGGCCGCCCTGGCCCGCGCCGAGGCGCGCACCGGGGTGGTTCCCGCGACGGCGGTGGCGCCGATCGAGGCGGCCTGCCGCGCCGAACTGTACGA CCCGCTGGCGCTGGCCGAGGCGGTCGCCACTGCCGGCAACTCGGCGATCCCGCTGGTCAAGGCGCTGGGCCGCCAGGTGGCGGCTGGCGACGCCGAGGCC GAGCGCTACGTGCATCTCGGCGCCACCAGCCAGGACGCCATGGACAGCGGCCTGGTGCTGCAACTGCGCCGTGCGCTGGCCTTGCTCGAGCAGGATCTGC AACGTCTTGCCGAGGTCCTGGCGGACCAGGCCGAACGGCATGCCGACACGCCGCTGGCCGGGCGCACCTGGTTGCAGCACGCCACCCCGGTGACCCTGGG CATGAAGCTCGCCGGCCTGCTCGGTGCCTTGACCCGGCACCGCCAGCGCCTGCGCGAGTTGCGCCCGCGCCTGCTGGTGCTGCAATTCGGCGGCGCCTCG GGGACGCTCGCCGCGCTCGGCGAACAGGCCCTGCCGGTGGCCGCGGCGCTGGCCGAGGAGCTGGGCCTGGCTTTGCCCGAACAACCCTGGCACACCCAGC GCGACCGCCTGGTGGAATTCGCCAGCGTGCTCGGCCTGGTGGCCGGTAGCCTCGGCAAGTTCGGTCGCGATGTCAGCCTGCTGATGCAGACCGAGGCCGG CGAGGTCTTCGAGCCGGCCGGCGCCGGGCGCGGCGGTTCCTCGACCATGCCGCACAAGCGCAACCCGGTGAGCAGCGCGGTGCTGATCGCCGCCGCCACC CGTGCGCCGGGGCTGGTCTCGACCCTGTTCGCGGCGATGCCGCAGGAACACGAGCGCAGCCTCGGTCTCTGGCACGCCGAGTGGGAAACCCTGCCGGAAC TCTGTTGCCTGGTTTCCGGCGCGCTGCAACAGGCGATCGGCCTGCTCGAAGGCCTGGAGGTGGACGCCCAGCGGATGCGCCGCAACCTTGGCCTGACCCA CGGCCTGGTGCTCGCCGAGGCGGTGAGCATCGCCCTGGCCCGCCGTATTGGCCGCGAAGCCGCGCACCATCTGGTGGAACAGTGCTGCCGCCGCGCCGTC GAGCAGCGCCGCGAGTTGCGCGCGGTGCTCGGCGAAGAGGCGCGGGTGAGCGCCGAGTTGTCCGGCGACGAACTGGACCGCCTGCTCGATCCCGCCCATT ACCTCGGCCAGGCCCGCGCCTGGGTCGAGCGCGCGCTCGCCGAACACCATGCCCTGGGCTTCGAACCCCATCCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGGAGATCCCTTCGTGCCAACCGTACGCCTCGCCGACGGCGACCTGAACTACTCCCTGGAAGGACCGGCCGGCGCGCCGGTCCTGCTGTTGTCAAACTC GCTGGGCACCGACCTGGGCATGTGGGACACGCAGATCCCCGCACTCACCGCCCATTTCCGCGTGCTGCGCTACGACACCCGCGGCCACGGCGCCTCGCTG GTCACCCCCGGACCGTACGCCATCGGCCAGCTCGGCGCCGACGTGCTTGCCCTGCTCGATGCCCTCGAGCTGCCGCGCGTGCATTTCTGCGGGCTGTCCA TGGGCGGCCTGATCGGCCAGTGGCTGGGCATCCACGCCGGCGAGCGGCTCGGCCGGCTGGTGCTGTGCAACACCGCGGCGAAGATTGCCAGCGACGAGGT CTGGAACACCCGCATCGATACCGTCCTGAAAGGCGGCGAGCAGGCCATGCGTGACCTGCGCGACGCCTCGGTGGCGCGCTGGTTCACCGCGGGCTTCGCC
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Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MSDVPANQLFDAYFTAAPMRAVFSDRGRLQGMLDFEAALARAEARTGVVPATAVAPIEAACRAELYDPLALAEAVATAGNSAIPLVKALGRQVAAGDAEA ERYVHLGATSQDAMDSGLVLQLRRALALLEQDLQRLAEVLADQAERHADTPLAGRTWLQHATPVTLGMKLAGLLGALTRHRQRLRELRPRLLVLQFGGAS GTLAALGEQALPVAAALAEELGLALPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPAGAGRGGSSTMPHKRNPVSSAVLIAAAT RAPGLVSTLFAAMPQEHERSLGLWHAEWETLPELCCLVSGALQQAIGLLEGLEVDAQRMRRNLGLTHGLVLAEAVSIALARRIGREAAHHLVEQCCRRAV EQRRELRAVLGEEARVSAELSGDELDRLLDPAHYLGQARAWVERALAEHHALGFEPHPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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