Pseudomonas aeruginosa MSH3, P999_03890
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33376
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | NF037995 | NCBIFAM: TRAP transporter substrate-binding protein DctP | - | - | 55 | 315 | 9.8E-46 |
| PANTHER | PTHR33376 | - | IPR018389 | TRAP transporter solute receptor DctP | 18 | 331 | 2.2E-70 |
| Pfam | PF03480 | Bacterial extracellular solute-binding protein, family 7 | IPR018389 | TRAP transporter solute receptor DctP | 49 | 325 | 2.1E-82 |
| Gene3D | G3DSA:3.40.190.170 | - | IPR038404 | TRAP transporter solute receptor DctP superfamily | 36 | 348 | 8.1E-109 |
| Coils | Coil | Coil | - | - | 271 | 291 | - |
| CDD | cd13677 | PBP2_TRAP_SBP_like_6 | - | - | 38 | 341 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.