Strain | Pseudomonas aeruginosa MSH3 genomic scaffold adgeF-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGTTCCAGCAGCGGCGCCGGCATGCGCGGCGCGCCGCGCATGATCTCGCAGGAGAAGACCCTGGCCGCGTGCGGCCGCTCGGCGCCGATGCGCATCTT GTTGTCGACGTAGGCGCGTAGCGCCTCGGCGGGCGGCTGGTCGCCGGCGAATGGCCGGGAGGCTTCCAGCAGGGGCTCGACGATGCTGTCCAGCACCGCC TCGTAGAGTTGCGCCTTGGAGCGGTAGTAATAGAGCACGTTGGCCTTCGCCACGCCGGCGCGCTCGGCGACGTCGCTGAGCCGGGCGGCGCTGAAGCCGC AGTCGGCGAAGACTTCGCAGGCGGCGTCGAGGATCAGTTGCAGGTTGCGTTGGCGGATCTTCTTCATCGGGACCGATACGGGGCAGGTTTCGTTGTTAAT ATTTTTATATAACGAACGCCTTGTGCCTGGATAGTCGTCGTCAGGCCGGCGACGCTTGATCGGATGCGCATTGCCAAGCCGTGGGGGCGCTGGTATCTGT
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DNA Sequence for Gene |
>P999_01824
ATGCATGAACAGTACCAGGCTCCGCTTCCCGTGAATTCCCCAGCGCTTCCCGAACCCTTCTACTACCTGCACAACTTCCGCGCGGTGCTCGCCTGGATCG GCGAACGCTATGCCGATCTGCTCGACGATCAGGAACGTGCCTTCATCGCCGCGTTCGCCGAGCTGCCCGAGGCCAGCCAGGCCCTGCTGGTGCGCATGGT GATGCGCAAGGGCACGCTGTTCCGCGAAGGCAAGCTGGCCTATGCCGAGATCGGCGACACGCGCGCCGCCGTGCAACCGCTGTTGGCATTGGGCTGGGTG GACGCGCAGCCGACCCTGGAACTGGCGCAACTGTTCGGCTTGCTGAAGAAGGACGAATTGTCGCAGCTGTTCAGGGACCATCTCGGGCGCGCGAACCTGC GCAAGGATGCGTTGCTGGAACGGCTCCAGCCGTTGTTCCCCGAGGCGCGGCGGCTCGCCGAGTGGCAGGCCGACTTCGCCGAACCGGTCTACGAGTTGCG CTGCATGGCGCTCTGCGACCGCTTGCGGTTGATGTATTTCGGCAACCTGTGGCAGGACTGGTCGGAGTTCGTCCTTGCCGACCTGGGTATCTATCGTTAC GAAAGCGTCGAGTTTTCCGCCGACTCTCGCGGCTTTCGCCTGCGCGCCGACGTCGACGCCTATCTCCACCTGTTCGACTGCCGCCAGCGCTTCGACCTCG GCGAGCCGCTGGAGGAACTGCTCGCCGGCCTGCCGGGCGAACCCTACGCCAATCCCTGGCTGGAAGGGCGGCGGGTCAAGCTGCTGTTCCAGTTCGCCCA GCACTGCGAAAAGCAGCGGGATTTCGACCTGGCCCAGCGGCTCTATCGCCAATCCAGCCACCCCGGCGCGCGCCTGCGGGCGATTCGCAGCCTGGAACGC GGCGAGCGCTTCGCCGAAGCCCATGCATTGGCGCGGGAGGCCAGCTGTGCGCCGGAAAGCGACGCCGAACGCCAGGGCCTGGCCCGATTGCTGCCGCGCC TGCAAGGCAAGCTCGGCCTGCCGCGACAGGCGCGGGCGGCGGCTCCGGAAATCGACCGCCTGGACCTGTGCCTGGCGTTCCCGAGCGAACCCTGTAGCGT CGAGTGGGCGGTCCGCGAGCACCTGGAAGAGCCCGATTGCGCGGTGCACTACGTCGAGAACGGCCTGATCAATTCGCTGTTCGGACTGCTCTGCTGGGAG GCGATCTTCGCCGCCATTCCCGGGGCGTTCTTCCATCCCTTCCACAGCGCGCCGGCGGACCTGCACAGCGCCGACTTCCGCCAGCGCCGCGCCGCCCTGT TCGAGGCCTGCCTGGGACGGCTGGAGGACGGCAGCTACCGCGACGCGATCCGCTGTCGCTACCGCGACAAGTTCGGCCTGCAGTCGCCCTTCGTCTACTG GGAACTGCTTGGCGAGGAACTGCTCGAACAGGCGCTCGATTGCCTACCGGCGGCCCACCTGCGCGCCTGGTTCGAACGCCTGCTGGAGGATATCCCGGGC AACCGCGCCGGCCTGCCGGACCTGATCCAGTTCTGGCCGGCGCAGCGGCGCTACCGGATGGTCGAGGTCAAGGGACCGGGCGACCGCCTGCAGGACAACC AGTTGCGCTGGCTGCAATTCTGCCGCGAGCGGGAGATGCCGGTGGCGGTCTGCTACGTGCGCTGGCATGTCGATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAGGGCGGCGAGGCGCTGTACCAGGTGGCGGTGCGCGCGCTTTGCGAGTTCAGCGCCAAGCGCGGCGACCTCGACCTGCGCTTCACCCCGTCGCCCAGC GCCCTGGAAGGCATCGCCGGACATACCCTGGTGACCTCCCGGCGCCCCGCTCACTACCAGCGCGAAGTGGCGCTGGACGGACGCTATCGTCACTTGCAGG TGCGCGGCCGGGCGGATGGCTACGATCCGCAGGCGAACTGCCTGGAGGAAATCAAGACCCACCGCGGCGACCTCGCCCTGCAACCGGCCAACCACCGGCA CCTGCACTGGGCCCAGGCCAGGGTCTACGGCTGGCTGCTCTGCGCCGAACGGAAGCTGGAGGAAGTCGAACTGGCGCTGGTCTACCTGGAGGTCGGCAGC CAGAAGGAGACCCGCTTCGTCGAGCGGGTGCGGGCCGACGAGCTTCGGCTGTTCTTCGAGAGCCAGTGCCAGGCGTTTCTCGCCTGGGCCGAGCAGGAAC
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Amino Acid Sequence |
>hypothetical protein
MHEQYQAPLPVNSPALPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWV DAQPTLELAQLFGLLKKDELSQLFRDHLGRANLRKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRLMYFGNLWQDWSEFVLADLGIYRY ESVEFSADSRGFRLRADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRSLER GERFAEAHALAREASCAPESDAERQGLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEEPDCAVHYVENGLINSLFGLLCWE AIFAAIPGAFFHPFHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPG NRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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