Strain | Pseudomonas aeruginosa MSH3 genomic scaffold adgeF-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCTGGGTGGCGGCCGAGGGCTTCTCGCAGACCGCCCGCCGCGCCGAGGTCGGCGCGGCCAGCCCGGCGAGGTTGAACAGGTGGTGGGTTTCCGTCTCG TTGCACAGCAGGGCCCGGGCGATGGCTCCGATCACCTGCTCCGAAGCGCGTACCGCGCGGCCCTGCTCCAGCCAGGTGTACCAGGTCACGCCGACCCCGG CGAGCTGCGCCACCTCCTCGCGACGCAGGCCCGGCGTGCGTCGGCGGCCGAGGCGGGAAATGCCGACCCGCTGCGGCTCGATGCTTTCCCGCCGGCGGCG CAGGAAGGCCCCCAGCTGTTCGGCGCGGGACGGCTGCGCGGGGCTTTCCGCAGCGTGGCTGGCAGGGGCGTCGAGGGGCATGGCGAAGTCCTCCGAAGGG CAGACGGGTAGCGCCAATACCAGGATAAGCAAGAACTGGTACCGGGTTAGCCACAAGCGCATGCTGCCAGCCCACCCCCTTCCGCACAAGGACTCCGCCC
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DNA Sequence for Gene |
>P999_01136
ATGCCCAGCACCGTCTCGTCGTCGCGGCTCGGCCTCGCCGGGCTCTGCATCCTGCTGGCGGGGCAACTGTTGCCGATGATCGATTTCTCCATCGTCAACG TCGCCCTCGACGCCCTCGCCCATTCCCTCGGCGCCAGCGAAACCGAACTGGAACTGATCGTCGCCGTCTACGGCGTGGCCTTCGCCGTGTGCCTGGCGAT GGGCGGCCGGCTTGGCGACAACTACGGCCGTCGCCGCCTGTTCGATCTCGGCGTCGCCCTGTTCGCCGTCGCCTCGTTGCTTTGCGGGCTGGCCGGTTCG GTCTGGCTGCTGTTGGTGGCGCGCGCCCTACAGGGCGTCGGCGCGGCGCTGGTCGTGCCGCAGATTCTCGCCACCCTGCATGTCAGCCTCAGCGGCCACG CGCATTCCCGCGCGCTGGCCGCCTACGGCGCCATCGGCGGCCTGGCCTTCGTCGTCGGCCAGGTGCTCGGCGGCTTCCTGGTCTCCGCCGACATCGGCGG CCTCGGCTGGCGCAGCGTGTTCCTGATCAACCTGCCGATCTGCCTCGGCATTCTCCTTTGCAGCCGCCGCTGGGTACCGGAGACCCGCGCCGAGCATGCC GCCCGCGTCGACGCGCCGGGCACCCTGCTGCTCGCCGCGCTGATCCTCTGCCTGCTGCTGCCGCTGGCTCTCGGCCCATCGCTGCACTGGTCCTGGCCCT GCGCCCTGCTGCTGGCGGCGGCGGTGCCGCTGCTGGCCTGGCTGTGGCGCACCGAGCTGCGCCAGGAACGCCGCCAGGCCTGGCCGTTGCTGCCGCCGTC GCTGCTGCGCCTGCCGAGCATCCGCTTCGGCCTGTTACTGGCGATCCTGTTCTTCGCCTGCTGGAGCGGCTTCATGTTCGCCCTCGCCCTGGCCCTGCAG GCCGGCGCCGGTCTCTCGCCGGTACAGGCCGGCAATGCCTTCATCGCCCTCGGCGCCTCCTACTTCGTCTCGGCGCTGCTCACCGCCCGGGTGGCGGCGC GGATCGGCCCGGTACGCCTGCTGCTGCTCGGCTGCGTCATCCAGATGTGCGGCCTGCTCGGCCTGATGCTGACCCTGCAACGGGTCTGGCCGCAGCCGGG CATCCTCAACCTGGCGCCGGCGACCCTGGTGATCGGCTTCGGCCAGGCGTTCATCGTCAGCAGCTTCTTCCGCATCGGCCTCTCGGAGGTGCCGGCCGCC CAGGCCGGCGCCGGCAGCGCCATGCTCGCCACCGTCCAGCAGGCCTCCCTCGGCCTCGGCTCGGCGCTGCTCGGCGCGGTGTTCGCGCACAGGCTGGAGC GCCATGGCGACTACCTGGAAGCGACGCAGACGACCCTGGCCGTCGAGTTCGTCCTGATGACGCTGCTGCTCGGCGCCACCTGCCTCTTCTACCTGCGCCG CGTGCGCACGGTGCCATTGCGCTGCGATTCGCCGGGCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCGCGGCCGGGCCCTGTTCCCGGCCGCCGGCGCCCCGTATGCTGGCGCGGTCCCCCAGCCAGGCCTTCGCCCCGATGCACGACCTGCTCGCCACCCC GCCCCCCGCCGACCTCGCCAGCCTGCTGGCCAGCCTGCGCCAGGTCGAGGCGCTGCTCGACGCCATGCCCGGCGTGGTGTTCTTCGTCAAGGACGAGCGC GCCCGCTACGTCCTGGTCAACCGCACCCTGGCACGCCGCTGCGGCGTGAAGGACAAGGCCGAACTGCTCGGCCGCAGCGCCGACGAGGTCTTCCCTTCCA GCCTCGGTCCGCTCTATGCCGAGCAGGATCGGCGCGTGCTGCGCGGCGGCGCGACGCTGGAGAACCAGTTGGAGCTGCACCTCTATCCCGGTCGCCAGCC GGGCTGGTGCCTGACCCACAAGCAGGCGCTGCGCGATGCCGACGGGGCGATCATCGGCATGGCCGGCATCTCCCACGACCTGCCGGCGGCGCAGTCGGCG
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Amino Acid Sequence |
>MFS transporter
MPSTVSSSRLGLAGLCILLAGQLLPMIDFSIVNVALDALAHSLGASETELELIVAVYGVAFAVCLAMGGRLGDNYGRRRLFDLGVALFAVASLLCGLAGS VWLLLVARALQGVGAALVVPQILATLHVSLSGHAHSRALAAYGAIGGLAFVVGQVLGGFLVSADIGGLGWRSVFLINLPICLGILLCSRRWVPETRAEHA ARVDAPGTLLLAALILCLLLPLALGPSLHWSWPCALLLAAAVPLLAWLWRTELRQERRQAWPLLPPSLLRLPSIRFGLLLAILFFACWSGFMFALALALQ AGAGLSPVQAGNAFIALGASYFVSALLTARVAARIGPVRLLLLGCVIQMCGLLGLMLTLQRVWPQPGILNLAPATLVIGFGQAFIVSSFFRIGLSEVPAA QAGAGSAMLATVQQASLGLGSALLGAVFAHRLERHGDYLEATQTTLAVEFVLMTLLLGATCLFYLRRVRTVPLRCDSPGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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