Pseudomonas aeruginosa MSH10, Q000_04188
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MSH10 genomic scaffold adgfw-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGGACTGACCATCTGCCACTACCTCGTCCAGCTTCTCGGTGGGACATTGGAAGTTGTCAGTGAGAGAGGTCTGGGCAGCAGTTTCGCGATGTGTCTA CCCACGCAATGCCCCGCCGAAAAAAACGTTGTTGCGTTGGCTGCGAGCCAGCCAGTGCCGGTGTATATCCGCTGCCGCCCCAGCGACCTGAGCGATGCCC TGGCGGGCTGGCTGCAACGCCAGGGAATGCAGCCTCGATCGTGGCAAGCCGGACACAATTCCGGAGCGGTATTGCTGGAGTGCCTGTTGCTCGGAGACCG GCCTCTGGCTGATCGGGACTGGCATGGTCCGCGGGTTATCGCCAGTGTCCAAGAGCCGGACAAGGCGAGCATGAGAGGACGCGCCCGGCAGGTCAGCCTG TATGACATGGATGCCATCGGAAAGGCCGTCAGGTCGGCCCAAGAGCTGGTCGTGCACAGCGACCTTTCCAACTGCTATCTATCCTGAGAGGAGGCAATAC
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| DNA Sequence for Gene |
>Q000_04188
GTGAGGGTGGCATTTCCCTGCAAGGTGCTGATCGTCGATGATCACCCATTTCAACTCGCCTATCTGCGTGAACTGTTCGGACGGGCTGGAGTTTCCGACC TGCATGTGGCCAGCAACGGCAAGGAAGCGCTGCAAATGCTCGAGCGGGAATCGTTCAGCCTGATCCTCAGTGACCTGATGATGCCTGGACTGGATGGTGT CCAGCTCATCCAGCGGCTCGCCGAGTGGGGAAATTGTCCGCCTGTGGCGTTGATGACAGCCATGCCGCATCGCATGCTGAAGAACGTGGCTGGCGTGGCG AGGGCGCTCGGTATCGACGTTGTTGATCAAGTGACCAAGCCGGCGACGCCAGAAGCGATACGACGTCTGCTGGCGCGTCTGGACACTGCCCGTGAGCCAG GTCGTCGGCGGACGACGAGGAGCCCGCGGGCATACCGGCGGGAGCAGATCGAGCTAGCGCTGTCCGCGGGTCAGATTCAGGCCTGGTTCCAGCCGAAGCT GCATCTCCCCAGTGGCAGAGTCATCGCAGCGGAGGCCCTGGCGCGCTGGTGCCATCCTCTGGAGGGGGTGCTGATGCCGGGTGAGTTTCTGGACGCCCTG GAACAGGCGGATCTGGAAGAGGAACTCTTGTTCCATATGCTGGAGCAGGTGGTGAGGACGCAGATTTTCTGGCAATCCCGGGGAGGGCGGATCAAGGTTT CCTTGAACCTGCCCGGCCATCTGCTGGATATCTCGGACTTGCCGGATCGCTTGTACAGCCGGGTGAGGGAACTGGGAGGGTGGCCGAGGGCACTGGTCCT GGAACTGACCGAGAGTAGCACGACATCGTTGCCCAGCAGCTTCCATGCCGCAGCCTGTCGTTTGCGAATGATGGGTTTCGGCCTGTCGCTGGACGACTTC GGGAAGGGATACAGCTCGTTTTCCAATTTGTTCGGAGCCCCCTTTACCGAGATCAAGATTGACCGCTCGCTGGTGAGTGAAAGCGTAGGCGATCCGGCTT GCGCGAGCGCCCTGGCCAGTATGATCGACCTGGCCGAGCAACTGGGGATGGAGGTTGTCGCGGAGGGGGTGGAAGATCGACAGCAACTGTCATTGATGCG GGAACTGGAGTGTGACTTCGTGCAGGGCTTTCTGATCGCTCCCGCGTTGCCGGCCGAGGTCTTTCTGCAGATGCTGCGCGAGAGGGCCGGGACTTGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGGGCCCGCTTCCGTGGTCGGGCCCCGGCTGGGGCGGCATGCCTGGGACTACATGGCTGTGAGTAGGTGTCATAATGATGCCTCCCACCATGACCCCTT CCACCGACTTCCTGGTTCCTGCCATGAGTGATGCCCATTCACCGATTCGAACGCTGGCTAGGACATCCCTGCGCCTGAACGTCTTCCTAGTGGTCTCTGT CTTGCTCGTCATCGTGTTGGTCCTGGCCTGCTACTGGTCATTGCTGCGGTTGGTGGAGGAGGAGGGGGATATCGTCGAGTTCCACTTCCTCAGACTGATG GGCAACATCCATAGTCATGAGGACTTTCTCGCACAACTTGCCCGGCGAACCGACGAGACAACTCGCAGGCTTGACCAGGCGGTCATTCCCTTGCAATACA AACTGCTTGAACGCTCTCCTCGCATAACGCTCTATGAAGGGCGTGAGTTCTCCTTTTCCTTGCCTTTCAACCTAGCCATGCGCGAGGAGGGGAATGGTGG
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| Amino Acid Sequence |
>hypothetical protein
MRVAFPCKVLIVDDHPFQLAYLRELFGRAGVSDLHVASNGKEALQMLERESFSLILSDLMMPGLDGVQLIQRLAEWGNCPPVALMTAMPHRMLKNVAGVA RALGIDVVDQVTKPATPEAIRRLLARLDTAREPGRRRTTRSPRAYRREQIELALSAGQIQAWFQPKLHLPSGRVIAAEALARWCHPLEGVLMPGEFLDAL EQADLEEELLFHMLEQVVRTQIFWQSRGGRIKVSLNLPGHLLDISDLPDRLYSRVRELGGWPRALVLELTESSTTSLPSSFHAAACRLRMMGFGLSLDDF GKGYSSFSNLFGAPFTEIKIDRSLVSESVGDPACASALASMIDLAEQLGMEVVAEGVEDRQQLSLMRELECDFVQGFLIAPALPAEVFLQMLRERAGTC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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