Strain | Pseudomonas aeruginosa MSH10 genomic scaffold adgfw-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTGTTCCAGCGCAGCCTGGGCATGGGCTTCGCCGACTGGCGGCGGCAGGTGCAGCTGGCGACCGCCTCCGCCGCGCTCATCGATGGCCGTCCGGTGGC AGGCATCGCCCATGCCCTGGGATATACGCCGAGCGCCTTCAGCGACATGTTCCGCCGCGAGCTGGGCGTCTCTCCCACCGAGTACAGGGCCGAGCATCAC CAGCCGTTCCAGCCTTGACCGGTATTCGATAGCGATTGGCCGATAGATGTTTTTTCGGCCAACTAGACTGGCACCATCGTTCACCGTCCCTGTCAGCCGC CATGAACTACCTGATCTCCCTCGGCATCGGCCTGCTGGTCGGCCTGCTCTACGCCGTACTCGACTTCCGCTCGCCGGCGCCACCCGCCATCGCCCTGGTC GGCCTGCTTGGCATGCAGCTCGGCGAACAGCTTTTCCCCCTTGGCCGCGACCTGCTGCAGCAGTGGCTGCACTGATCGCCGCGACGACACGGAGCCCCCG
|
|
DNA Sequence for Gene |
>Q000_03663
ATGAAAGCACTGCAATTCGACCGTACCGGCGACCTCGCCGCCCTCGAGCTGGTGGACATGCCCGACCCGCTTCCCGCCGCCGATGAGGTGCGGGTGGAAA TCCGCGCCGCCGGGCTGAATCCGAGCGACGTGAAGAACGTCCTCGGCCGCTTCCCCTATACCACCCTGCCCCGGGTACCGGGCCGCGACTTCGCCGGGGT GGTGGTGGAGGGACCGAAGGCTCTGCTCGGCCAGGCGGTCTGGGGCACCGGGCGGGAGCCGGGATTCTTCCGCGACGGTAGCCACGCGCAGTTCCTGACC CTGCCGGCCGCCGGCGTCGCGCTCAAGCCGGAAAGCCTGAGCTTCGCCCAGGCCGCCAGTTGCGGGGTGCCCTACAGCACCGCCTGGGACGCCCTGCAAC GCAGCCAGGTCAAGGCCGGCACCCGGCTCCTGGTAATCGGCGCCAACGGCGCGGTCGGCAAGGCCGCGCTGGCGCTGGCCAAGGCCCTGGGGGCCGAAGC GATCGGCGCGGTGCGGCGCGAGGAGCAACGCCAGGCGCTGGAAACGCAGGGCATCGCCGCGCTGCTGCTGGGCGAGCCGGCCGAACTGGCGGCACAGGTG GAAGGGATCTTCCCCGGCGGGGCCGAGGTGATCTTCGATACGACCGGTTTCTGGCTCGAGGCGGCGGTCCCGGCGCTGGCCGCCTTCGGTCGCCTGGCGA TCATCGCCGCACCGGCCGACGGCCATGTGCGCCTGCCGGCGTTGAACCTGTACCGTCGCGGTGGCTCGGTGGTGGGGATCAACTCGCTGCTCTATGGCGT GGAAGCCTGCGCAGGCTTCCTCGACGCCTTCGGCAAGCTGTTCGACCAAGGCCGCCTGCCGCTGCCGGACGGGCTGCGGGAAGTCCCGCTGGAGCAGGGC GTTGAGCAGTACCGGGCAGTGAACGAAGGCACCTGCGAGAAGATCATCCTGGTGCCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGACCAGCGGAATCCCGGCGGAACACGCCGGGATTCCGCTGCGCGCAAGACTACTCCGCGCCGACCGCGAGCTTGCGGGCGCTGCGCGCCTCCTCCAGCT GCATGCAGCGCTCGAGGAACAGGTACATGTAGTCGTAGCTCTTGCAGATCGCGTCGCGCAGTTGCCGGCGCAGCTCGGCGCTGGGATTGGTGCCGGCCAG GGTGCAGATGATCTCCAGCGCCTCCCAGGGGTGGGCATCGTCGTACTGGGCGTGGAGCTTGAGCCACTTCATGGCGCGCTTGCGGCCTTCCTTGGGGAAG GCGTTTTCGTAGACGCCGTTCGAACAGACCAGCGCCGACCACTCGCCGGTGACGCCTTCGATGGCGTAGTTGGTGGCGGCCATGGCCACCGGCAGTGAGT CGCTGGCGCAGGTGTGCCAGCACCAGTGGCTGAGCGCGTGCAGTTCGGCCGGCACGTCTTGCGCCTGGATCTCGGCCAGGCTCACGCCGTGGGCCTCGGC
|
|
Amino Acid Sequence |
>oxidoreductase
MKALQFDRTGDLAALELVDMPDPLPAADEVRVEIRAAGLNPSDVKNVLGRFPYTTLPRVPGRDFAGVVVEGPKALLGQAVWGTGREPGFFRDGSHAQFLT LPAAGVALKPESLSFAQAASCGVPYSTAWDALQRSQVKAGTRLLVIGANGAVGKAALALAKALGAEAIGAVRREEQRQALETQGIAALLLGEPAELAAQV EGIFPGGAEVIFDTTGFWLEAAVPALAAFGRLAIIAAPADGHVRLPALNLYRRGGSVVGINSLLYGVEACAGFLDAFGKLFDQGRLPLPDGLREVPLEQG VEQYRAVNEGTCEKIILVP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|