Pseudomonas aeruginosa CF18, Q002_02650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa CF18 genomic scaffold adgfD-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTGATGCTGAAAGTTTTGTACGGGTTGAAGAACTTTGAGGGCAAGTCGAAGTTCAAAACGTGGCTATATAGCATCACGTACAACGAGTGCATCACGCA GTACCGCAAGGAGCGCCGCAAGCGCCGATTGATGGATGCGCTCAGCCTCGACCCGCTGGAGGAGGCTTCCGAGGAGAAGTCGCCGAAGGTTGAGGAGCGG GGCGGATTGGATCGTTGGCTCGTCCATGTCAATCCGATAGATCGGGAGATTCTGGTTCTTCGCTTCGTCGCGGAACTGGAGTTTCAGGAGATAGCGGATA TCATGCACATGGGTCTGAGTGCGACGAAAATGCGCTACAAGCGGGCACTGGACCGCCTGCGCGAAAAGTTTTCAGATGCGACCGAAACATAGTTGGGTAA ATATTGTCTCTCTATGCGGGAAGTTCTGATAAACTTGCCACCCAAGTTGTGCGGCTGATTGTTGGACAACTAACTGACCATCAAGATGGGGATTTAACGG
DNA Sequence for Gene
>Q002_02650
ATGAAACTGAAGAACACCTTAGGCGTTGTCATCGGCTCGCTGGTTGCCGCTTCGGCAATGAACGCCTTTGCCCAGGGCCAGAACTCGGTAGAGATCGAAG CCTTCGGCAAGCGCTACTTCACCGACAGCGTTCGCAACATGAAGAACGCGGACCTGTACGGCGGCTCGATCGGTTACTTCCTGACCGACGACGTCGAGCT GGCGCTGTCCTACGGTGAGTACCATGACGTTCGTGGCACCTACGAAACCGGCAACAAGAAGGTCCACGGCAACCTGACCTCCCTGGACGCCATCTACCAC TTCGGTACCCCGGGCGTAGGTCTGCGTCCGTACGTGTCGGCTGGTCTGGCTCACCAGAACATCACCAACATCAACAGCGACAGCCAAGGCCGTCAGCAGA TGACCATGGCCAACATCGGCGCTGGTCTGAAGTACTACTTCACCGAGAACTTCTTCGCCAAGGCCAGCCTCGACGGCCAGTACGGTCTGGAGAAGCGTGA CAACGGTCACCAGGGCGAGTGGATGGCTGGCCTGGGCGTCGGCTTCAACTTCGGTGGTTCGAAAGCCGCTCCGGCTCCGGAACCGGTTGCCGACGTTTGC TCCGACTCCGACAACGACGGCGTTTGCGACAACGTCGACAAGTGCCCGGATACCCCGGCCAACGTCACCGTTGACGCCAACGGCTGCCCGGCTGTCGCCG AAGTCGTACGCGTACAGCTGGACGTGAAGTTCGACTTCGACAAGTCCAAGGTCAAAGAGAACAGCTACGCTGACATCAAGAACCTGGCTGACTTCATGAA GCAGTACCCGTCCACTTCCACCACCGTTGAAGGTCACACCGACTCCGTCGGCACCGACGCTTACAACCAGAAGCTGTCCGAGCGTCGTGCCAACGCCGTT CGTGACGTACTGGTCAACGAGTACGGTGTAGAAGGTGGTCGCGTGAACGCCGTTGGTTACGGCGAGTCCCGCCCGGTTGCCGACAACGCCACCGCTGAAG GCCGCGCTATCAACCGTCGCGTTGAAGCCGAAGTAGAAGCTGAAGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCTGAGCCTCTAAGGAAAAACCCGGCTCAGGCCGGGTTTTTCTTTGCCTGGAAAAAGACCGCTCGTCAGGCGCTCAGGGAAATCGGTTGCGACACGA TGTCGCGGGTTACTTCGCCGATCACCAGGATCGCCGGGCTTTTCAAGGCGAAACGTCCGGCGTCCCGCAGTAGCTCGCCGAGGTTGCTGCGGCATTCGCG CTGGTTGCCCAGGGTGGCGTTCTCGATCATCGCCAGCGGCGTATCCTCGGCCATGCCTCCAGCCAGCAGCCCGGCCTGGATCTCTGCGAGACGGGCGACG CCCATGTAGACCACCAGCGTGGTACCGCTGCGTGCCAGGGCTTCCCAGGCCAGCGGGCTGTTGTCCTGGGTATGCGCGGTCACCAGGGTCACGCCGCGGC TGATGCCGCGGTAGGTCAGCGGTATGCCGCAGGCAGTGGCGCCAGCCAGCCCGGCGGTGATGCCGTTCACTATCTCGCTGTCTATCCCGTGCCGGGCCAG
Amino Acid Sequence
>porin
MKLKNTLGVVIGSLVAASAMNAFAQGQNSVEIEAFGKRYFTDSVRNMKNADLYGGSIGYFLTDDVELALSYGEYHDVRGTYETGNKKVHGNLTSLDAIYH FGTPGVGLRPYVSAGLAHQNITNINSDSQGRQQMTMANIGAGLKYYFTENFFAKASLDGQYGLEKRDNGHQGEWMAGLGVGFNFGGSKAAPAPEPVADVC SDSDNDGVCDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAYNQKLSERRANAV RDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEVEAEAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site