Pseudomonas aeruginosa CF18, Q002_02007
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF18 genomic scaffold adgfD-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTGGAACGCTCCAGTCAAGCGCGAATCGAGCATCCGCGGGCGTTCCTGTACCGGACGGCGCTCAATCTCGCGGTCGACGAGCATCGCCGCAGCCGGG TGCGCAAGGCCGAGCCCTTGCACGTCCTCGACGAGGAGGAGGGTATGTCCGAGCCTTCCCCCCAGGTACTCGAGGACCAGCGTCAGCGCCTCGACCTCCT GACCCTGGCGCTGAACGAACTGCCGCCGCTGTGCCGCGAGTCCTTCCTCCTGCGCAAGCTGGAAGGTCTTTCCCACAACGAGATAGCGGCGCACCTGAAT ATCTCCCGCAGTCTCGTGGAAAAGCACATCGTCAATGCGATGAGGCACTGCCGCCTGCGCATGCGAGCCTGGGAGTCCAGTTGATCCAGCGCGGTTAAAT TTCGTTTCCCGGTCCTCGTTCCTAGTCAACAGACGCCCTTACGGGCCGCTCTTGACCTATCGCTCCCCGGTTTCGGGAGCCTATCCAGAGGACACTGGAA
|
|
| DNA Sequence for Gene |
>Q002_02007
ATGACCCAGGCTACAGCAACCGCCGTCGTTCACGACCTTATCGGTATCGGCTTCGGCCCCTCGAACATCGCCCTGGCGATCGCCCTTGAGGAACGCGCGA GGACCCAGGGGGAACTGCAAGTCCTGTTCCTCGATAAACAGGCCGACTATCGCTGGCACGGCAATACCCTGGTCAGCCAGAGCGAGTTGCAGATCTCCTT CCTCAAGGACCTGGTGTCCCTGCGCAACCCCACCAGCCCGTATTCCTTCGTCAACTACCTGCACAAGCACGATCGTCTGGTCGACTTCATCAACCTGGGC ACCTTTTATCCCTGCCGGATGGAGTTCAACGACTACCTGCGCTGGGTCGCCAGCCACTTCCAGGAGCAGAGCCGCTACGGCGAAGAGGTCCTGCGCATCG AGCCGATGCTGAGCGCCGGCCAGGTCGAGGCGCTGCGGGTGATCTCGCGCAACGCCGACGGCGAGGAGCTGGTGCGCACCACCCGCGCCCTGGTGGTCAG TCCCGGCGGCACCCCGCGTATCCCGCAGGTGTTCCGTGCGCTCAAGGGCGACGGCCGGGTGTTCCACCACAGCCAGTACCTGGAACACATGGCCAAGCAG CCCTGCAGCAGTGGCAAGCCGATGAAGATCGCCATTATCGGCGGCGGGCAGAGCGCGGCGGAGGCCTTCATCGACCTCAACGACAGCTACCCGTCGGTGC AGGCCGACATGATCCTGCGTGCCTCGGCGCTCAAGCCGGCGGACGATAGCCCGTTCGTCAACGAAGTGTTCGCGCCGAAGTTCACCGATCTCATCTACAG CCGCGAACATGCCGAACGCGAGCGTTTGCTGCGCGAATACCACAACACCAACTATTCGGTGGTGGATACCGACCTGATCGAGCGCATCTACGGCGTCTTC TACCGCCAGAAAGTCTCCGGCATCCCGCGCCACGCCTTCCGTTGCATGACCACCGTGGAGCGCGCGACCGCCACCGCCCAGGGCATCGAGCTGGCGTTGC GCGACGCCGGTAGCGGCGAGCTAAGCGTAGAGACCTACGACGCAGTGATCCTGGCCACCGGCTATGAGCGCCAGTTGCACCGCCAACTGCTCGAACCGCT GGCGGAGTACCTCGGCGACCACGAGATCGGCCGCGACTACCGCCTGCAGACCGACGAGCGCTGCAAGGTGGCGATCTACGCGCAGGGCTTCAGCCAGGCC AGCCATGGCCTCAGCGACACCCTGCTGTCGGTGCTGCCGGTGCGTGCCGAGGAAATCTCCGGCTCCCTGTACCAGCACCTGAAGCCCGGTACTGCGGCCC GCGCCCTGCACGAGCACGCCCTGGCCAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGCGCCACGCCGCCACGCCCTGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCGTTTTCGTTGCATGTCCCGGCCGTTCCGGCCACC ACTTTGCAGAGAAACGACATCGATGGGGATGCGTACCGTACTGACCGGCCTGGCCGGCATGCTGTTGGGTTCGATGATGCCGGTCCAGGCCGATATGCCG CGGCCGACCGGGCTGGCCGCGGACATCCGCTGGACCGCCTATGGCGTGCCGCACATCCGGGCCAAGGATGAGCGCGGCCTGGGCTATGGCATCGGCTACG CCTACGCGCGCGACAACGCCTGCCTGCTGGCCGAGGAGATCGTCACCGCGCGCGGCGAGCGGGCGCGCTATTTCGGCAGCGAGGGCAAGTCGTCGGCCGA GCTGGACAACCTGCCGTCCGACATCTTTTACGCCTGGCTCAACCAGCCCGAGGCGCTGCAAGCCTTCTGGCAGGCGCAGACGCCCGCGGTGCGCCAGTTG
|
|
| Amino Acid Sequence |
>L-ornithine 5-monooxygenase
MTQATATAVVHDLIGIGFGPSNIALAIALEERARTQGELQVLFLDKQADYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHDRLVDFINLG TFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQ PCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVF YRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAIYAQGFSQA SHGLSDTLLSVLPVRAEEISGSLYQHLKPGTAARALHEHALAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|