Pseudomonas aeruginosa CF27, Q003_05530
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF27 genomic scaffold adgfH-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTCGAACAACTACGGCCCGTACCACTTCCCGGAAAAGCTCATCCCACTGGTGATCCACAACGCCCTGGCCGGCAAGCCGCTGCCGATCTACGGCGACG GCCAGCAGATCCGAGACTGGCTCTACGTCAAGGACCATTGCAGCGCCATCCGCCGGGTCCTCGAAGCCGGGCAACTGGGCGAGACCTACAATGTCGGCGG CTGGAACGAAAAGGCCAACCTCGACGTGGTCGAGACCCTCTGCGCCATCCTCGACCAGGAGCAGCCGCGCGCCGACGGCCGCAGCTATCGCGAGCAGATC ACCTTCGTCAAGGATCGTCCGGGCCATGATCGCCGCTACGCCATCGATGCCACGCGCCTGGAGCGCGAGCTGGGCTGGAAGCCGGCGGAAACCTTCGAGA CCGGCATCCGCAAGACCGTGCGCTGGTACCTGGACAACCAGGACTGGGTGGCCAACGTAACCAGCGGTGCCTACCGCGAGTGGGTGGGTAAGCAGTACGC
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| DNA Sequence for Gene |
>Q003_05530
ATGAACCGGATCCTTCTCCTCGGCGCCAACGGCCAGGTCGGCTGGGAGCTGCAGCGCGCCCTGGCGCCGCTGGGCGAACTGCTGGTCTGTGACCGTCGGC GCGCCGATCTCGCCGACCCCGAAGGCCTGGCGCGACTGGTTCGCGCCGAGCGGCCGCAGTTCATCGTCAACGCCGGTGCCTACACCGCGGTGGACAAGGC CGAGAGCGATGCCGACAACGCCCGCCTGATCAATGCCCGCGCCGTCGCGGTACTGGCCGAGGAGGCCGCGGCCTGCGGCGCCTGGCTGGTGCATTACTCC ACCGACTACGTGTTCGACGGCGCGGGCAGCGTGCCTTTCGCCGAGGACGCGCCGACCGGCCCGCTGAGCGTCTACGGGCAGACCAAGCTGGAAGGCGAGC AGGCCATCCGCGCCAGCGGCTGCCGCCACCTGATCTTCCGCACCAGCTGGGTCTACGCCGCGCGCGGCGGAAACTTCGCCAAGACCATGCTGCGCCTGGC CGGGCAACGCGACGAACTCAAGGTCGTGGCCGACCAGTTCGGCGCGCCCACCAGCGCCGAGCTGATCGCCGACGTCACCGCCCAGGCCCTGCAGCGCCTG CGCTGGGATGCCGAGCTGGCAGCACGGGCCAGCGGCACCTACCACCTGGTCGCCAGCGGCGAGACGTCCTGGCACCTCTATGCGCGCTTCGTCATCGAAC AGGCGCTGGAGCGGGGCTGGGAGTTGCAGGCGACGCCGCAGCGGGTCCTGCCGATCGCCACCGAGGACTACCCGGTGCCGGCGAAGCGTCCGGCCAATTC GCGCCTCGACAACCGCAAGCTGCAACAGGTCTTCGGCCTGGTACTGCCAGACTGGCGCTACCATGCCGGACGCATGATCCAGGAACTGAGCGAGCAGGGA CCACTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACGCAAGGGCATCATCCTCGCCGGAGGCTCGGGCACCCGCCTGCACCCGGCAACGCTGGCCATCTCCAAGCAGTTGCTGCCGGTGTACGACAAGCCGAT GATCTACTACCCGCTCAGTACCCTGATGCTGGCGGGCATCCGCGAGATACTGATCATCTCGACCCCACAGGACACCCCACGCTTCCAGCAGTTGCTGGGC GACGGTTCAAACTGGGGCCTGGACCTGCAATATGCCGTGCAACCGTCGCCGGACGGCCTGGCCCAGGCCTTCCTGATCGGCGAGTCGTTCATCGGCAACG ACCTCAGCGCGCTGGTCCTGGGCGACAACCTCTATTACGGCCACGACTTCCACGAGTTGCTCGGCAGCGCTTCGCAGCGCCAGACCGGCGCCAGTGTCTT CGCCTACCACGTGCTGGACCCGGAGCGCTACGGCGTGGTCGAGTTCGACCAGGGCGGCAAGGCCATCAGCCTGGAAGAGAAGCCACTGGAGCCGAAGTCG
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| Amino Acid Sequence |
>dTDP-4-dehydrorhamnose reductase
MNRILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYS TDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRL RWDAELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQG PL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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