Pseudomonas aeruginosa CF5, Q004_01969
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF5 genomic scaffold adgfB-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCTTGATCAGATCAAGCTGGCCGGGGCCGTCTTTGTCCACTTCGTTGCCGGTCGTACCGAAATCCAGGGGAACGGTGATCTTGCTGTCGAAGGAGAG GATGCGGTCCTGCAATTCCTCTGCATGCTTCATGACTTTGCGTGGGTAGCTGGCGCTGCTCGGCCCGAAAGCTTTCCAGGCCAGCAGGCCTGCGCCGACG AGAGTAATGAAGAGGATCGGTAAGCCTAAGTAGAGGGCCTTGCTTGTACGTGGTCTGGTCATTGCCATCTCAGTCAGGGTCGAGATCGAGGAGCGCCGGC GGTTGCCTGTCGAAGCGGGTCCACCTGTCAGGGAGGAACGAGGCGGGAGAGGGAAAATTTAGCCATGGCCCCTCTCGACCATGGTGTCGAGGCTTGGTGG CGTGCCAGTAAATTTGCCGACGGACGGAACGTTCTAGCTGGATAAAGCGGGCTTCGCGGTTGACACAGGTAGGACGATGACGGTTTCTCGACGAGGTTTC
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| DNA Sequence for Gene |
>Q004_01969
ATGGCCGGCTTGGCGCTGACCGGAGCGGCGGCGTTGCCGGTGGCTTACTACACCCGCCGTCACTTGGCCCGCGAAGAAGAGGAACCGCCCACGGCCGACG AGGCCGTGCTCGATCTGGCCGATACCGCGGGTATGCGCCTGGGTGGTCGCTTGCGTGGGGTGTGGGACCTGCGTCTGGTCGGTGCTGATGCTGGCTTGCC CGGCCTGCCGGCGGAAGGCTTGCAAATGGTGCTGGATGTCGCTCCCAAGGGGCGTGGCCTGATTGGCTATCTCGATACTCCTACACGACTGCTGTCGAGC GATGAGCCCAGGTTCCGTGTGAGCGGCGACCTCGTTGGAGCCAGTTCGGCGCGAATTCGCTGGCGCCTGGTCGACCAGGCTTCGGCGTCGATGGCGCCGA CCCATGACTGCTCCGCAGTATTTGATGAAGTCTGGGATAATTTCGCCAATGCAGGGGACGGCACGCTGAGCGGGCATATCTTGCGCCTGGATCGTTCTCC GGGGCTGCCGGAGGAAGATTTCCGCTTCGTAGCGGTCAAGCGACACTTTCCGCCAGCTCGCGAACGCATCGCTCTCAACGAGAAATTGCTGGGATGGTTA GTGTCGCCGCAGCACCGGTTGTTCCACCAGCTATGGCACGCCTCGCGGGACAAGTGGCATCAACTGTCGGAGAAGCAGCGCAATGCGTTGCGTGGGGTGG GCTGGCAGCCTGGCCCGCTGGACCGGGAGCGCGATGCGCGGGGGCCAAGAAAGGATCGCAACGCTTCTGGTATCGACTTCCTTTTCATGCATCGGCATAT GCTGCATACCGCACGATCCATGCAAGACCTGCCATCCTGGAGGCGTTTGCCGCGCCCCGCGGTTCCGCTGGAATTCGATCGTCCCGGCTTCATCCGCTAC TTCGACAATCCAGATGGTTTCTCCGTGCCGCCGGCCTGGGTAGCGGTCGGGGACGACGAATACAGCGAATGGCTGCGTGGGTTGAAAAGCGCAGAAGCGT ACCATTCCAATTTCCTGGCCTGGGAGTCGCAGTACCAGGATCCGGAATATCTGGCGAAGTTGACCCTGGGACAGTTCGGCTCGGAGATGGAGCTGGGTAT GCACGATTGGTTGCATATGCGCTGGGCGACCGTGACCCGCGACCCATCCAACGGGTCGCCGGTCATGGGCGACCGCGTCCCGTCGGATTTCTCGCCGCGC TGGTTCCGCCCGGAGAACGATTTCCTCGGCGATCCGTTCTCGTCCCATGTGAATCCCGTGTTCTGGTCCTTCCATGGCTGGATCGACGACCGTATCGAGG ATTGGTACCGTGCCCACGAGCGTTTCCATCCCGGCGAAGTGCGGCGTCGAGAGGTGCAGGGTATTCCCTGGTTTGCGGCTGGGCGCTGGGTGGAGGTGGA CGACCCTTGGCTCGGCCCGGCGACCCATGGTTGCGGCCTGTCGGATCTACAGGCGAGCAGCAATTCGGTGGAGCTGGACGTGGAAACCATGAAGCTGGCG GTACGCATCATCTTCAGCGAAGAAGACCAGTTGAGCGGCTGGCTCAAGCGTGCGCCGCGGCGGCCCTGGTACGCGCGCAACCTGAAGCTGGCGCGCGACC AGCTCAGGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGCGAAAGAGCGAGTAAGGATGGAGGAGGCCCGCGCAACGCGGGCCTCAGTCTTTCCGCGCGAGACCCTGGCGGTCGCTCTGCCAGCCGCCGCCGAGG GCCTTGTACAGGCCGACCGAGGCCTGCAGGCGGGCCAGTCGCAGTTGCACGGCGGCATCCTGCGCCGCGTACAGCGTGCGTTGCGTTTCGAGGACCGTCA GCAGGGTTTCCGCGCCGGCCTGGTAGCGGCTGTCGGAGAGATCGAAGGCGCGCTGCGCCTGCTCCAGCTCCTGCTGCTGCCAGTGCAGCTGGCGGTCGAG GCCGTCGATGCTGTTCAGCGAGCGTTCGGTGTCGGCAAAGGCGGTGAGGATCGCCTTGCGGTAGGTTTCCAGCAGTTCTTCCTGGCGCGCCAGGCTGCGG TCGCGCTCGGCGCGCAGGCGGCCGTGGTTGAAGATCGGGGCGAGCAGGTTGGCGCCCAGGTTGTAATAGGGGTTGCGGAAAGTGTCGGCGGCGCGGTTGG
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| Amino Acid Sequence |
>protein PvdP
MAGLALTGAAALPVAYYTRRHLAREEEEPPTADEAVLDLADTAGMRLGGRLRGVWDLRLVGADAGLPGLPAEGLQMVLDVAPKGRGLIGYLDTPTRLLSS DEPRFRVSGDLVGASSARIRWRLVDQASASMAPTHDCSAVFDEVWDNFANAGDGTLSGHILRLDRSPGLPEEDFRFVAVKRHFPPARERIALNEKLLGWL VSPQHRLFHQLWHASRDKWHQLSEKQRNALRGVGWQPGPLDRERDARGPRKDRNASGIDFLFMHRHMLHTARSMQDLPSWRRLPRPAVPLEFDRPGFIRY FDNPDGFSVPPAWVAVGDDEYSEWLRGLKSAEAYHSNFLAWESQYQDPEYLAKLTLGQFGSEMELGMHDWLHMRWATVTRDPSNGSPVMGDRVPSDFSPR WFRPENDFLGDPFSSHVNPVFWSFHGWIDDRIEDWYRAHERFHPGEVRRREVQGIPWFAAGRWVEVDDPWLGPATHGCGLSDLQASSNSVELDVETMKLA VRIIFSEEDQLSGWLKRAPRRPWYARNLKLARDQLRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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