Strain | Pseudomonas aeruginosa CF5 genomic scaffold adgfB-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCCCTGCAAAGGCAGGCCGAGGAGCAGCAGGCGCTCTTCCGCAGCCCACGGCGCCAATAGCGGAAAATCGGCGGGAGGCGCATGCACCACGACCTGCAAG CGGGAGTCGAGACGCCAGAACCGCTCTAGAACGGGAATATCCGCGCCTACCGACGGCATCCCGAGAAACACCACGGCATACGGCGCATCGGCCTGGAGGG CCGAGCGTATCCGCCCCAATGCCTCCTCGGCGCTTCCCGCCGTATCCACCTGGTAGCCCCGCTCAGGCGCCACGGGAGGCGATTCGGCCCCTAGGGTTCC CTGCAACAACCCGCATACACGGTCTCGATCCGCCTGCCGCTCATCGATCACCAGCAAGCGCCGGTTCCTGATGGGTAACGTCTCCATGATCCGCACCTCC GCTCGCCCAGCCGCCGCGTGCATGCGCCCTCGTCCAGGCCAGACTCGGACTATGCTTGCCTGAAGTATTCAGGCAAAACTCACCCGGTGGACAGACACTC
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DNA Sequence for Gene |
>Q004_01773
ATGAACGATAGCGCACCTCCTTCCAACGAGACGGAGATCCGCTTCAGCGTGCTGCTGGTCGACGACGAGCCGCTGATCCTCAGCAGCCTGCGCCGGCTGC TACGCAACCAGCCCTACGACCTGTTGCTGGCGGAGAGCGGCGAACAGGCCCTGCAACTGCTGGAAAGCCGGCCCGTGGACCTGGTGGTGTCCGACGCCCG CATGCCGAACATGGACGGCGCTGCCCTGCTCGCGGAAATCCATCGCCGCTCCCCGGAAACCATTCGCATCCTGCTCACCGGCCATGCCGACCTGCCAACC ATCGCCAAGGCCATCAATGAAGGGCGCATCCACCATTACCTGAGCAAGCCGTGGAACGACGACGAGTTGCTGCTAACCCTGCGCCAGTCGCTCGAATACC TGCATTCCGAGCGCGAGCGGCGGCGCCTGGAGCGACTTACCCAGGAGCAGAACGACCGCCTCCAGCAACTCAACGCCACGCTGGAAAAGCGCGTTCAGGC GCGCACCGCCGAACTGCAGCAGACCGCCGACATGCTCGACCTCGCCTATGAGGAGCTAAAGCGCAGCTACGTGGTCGGCACCGAAGTCTTCTCGCTACTG GTCAACCAGCGCCTGCCCAAGGACAAGCAGACCAACCAGCAAATCATCGAACTGGTCCGCGCCTGCTGTGCCAGCGGCCTCGTCGACGAATCGGATGGTC GCGACCTGGCGATGGCCGCGGCGCTCTACAACATCGGCAAGCTAAGCTGGAACGACACCCTGCTCAGCTCGCCCTCGGACCTGCTCTATCACCACGACCG CGATCGTTTCCGCGGCTACCCGGAACTCAGCGAGTCGCTGCTGATGTCGCTGGAACCGATGCAGGACGCCGCCCGCCTGATTCGCCATCACCAGGAGCAC TGGGACGGCAGCGGCTATCCGGACCACCTCAAAGGCGAGTCCATCCCCCTGGGCTCGCGCCTCTTGAAGCTGGCGGTGGATTTCGTCGAGTTGCAGCGTG GGCTGATCCTCGAACGGCGCATGAATCGCGACGAAGCGCTGATCTACATCCGCAAGTACGCCGGCCGGCTGTACGACCCCGAGCTGATCGAACCGTTCAT CCAGGTCTGCGCGACGACCCTTGCCGACGTCACCCTGGCCGATCCGCAAGTCCGTGCCCATGGCACCCGCGACCTGGTTCCGGGCATGGTGCTGGCGCGC AACCTCACCGCCAACAACGGCATGCTGCTGCTCAACGCGGGCAAGGTCCTGAACCTGGCGCTGATCGAGAAGCTGATCGCCTTCGAAGCGATCGAAGGCG CACGCTACACGCTGTTCGTGCGCCTCCCGGAGTCGACGACCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCCCCCGTCAGATCTTGAAGCGCTCCACCGACGAGCGCATGGTCGCCGCAACCTCGTTCAGGCGCCTGGCGGTGGCGGCCATCTCGTGCATCGCCTG GGTGTTCTGCTGCGAACGCTGGGCGATGAGCTCCACTCGCTGGGCGATTTCATCGCTGGCGCGCGACTGTTCGCGGATGGTCTGGGAAATTTCGTCAACC ACCGACGCAGCATGACGGGTTCCATCGAGGATCTCGTTGATCGACACCCCTGCCTGGCGGGCGAACGACACCCCCTCGTTGACCCGGCTCACGCCGGCCT CCATGCTGTTGATCGCCTGCCCCGTGCTGGCGCGGATGCGCTCGATCATCGCGGTGATCTCCTGGGTCGACTGGGTGGTCCGCGCCGCCAGCCCGCGCAC CTCGTCGGCGACCACGGCGAAACCGCGCCCGGCCTCTCCGGCCCGCGCCGCCTCGATGGCGGCGTTCAATGCCAGCAGGTTGGTCTGCTCGGCGATCCCC
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Amino Acid Sequence |
>two-component system response regulator
MNDSAPPSNETEIRFSVLLVDDEPLILSSLRRLLRNQPYDLLLAESGEQALQLLESRPVDLVVSDARMPNMDGAALLAEIHRRSPETIRILLTGHADLPT IAKAINEGRIHHYLSKPWNDDELLLTLRQSLEYLHSERERRRLERLTQEQNDRLQQLNATLEKRVQARTAELQQTADMLDLAYEELKRSYVVGTEVFSLL VNQRLPKDKQTNQQIIELVRACCASGLVDESDGRDLAMAAALYNIGKLSWNDTLLSSPSDLLYHHDRDRFRGYPELSESLLMSLEPMQDAARLIRHHQEH WDGSGYPDHLKGESIPLGSRLLKLAVDFVELQRGLILERRMNRDEALIYIRKYAGRLYDPELIEPFIQVCATTLADVTLADPQVRAHGTRDLVPGMVLAR NLTANNGMLLLNAGKVLNLALIEKLIAFEAIEGARYTLFVRLPESTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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