Strain | Pseudomonas aeruginosa UDL genomic scaffold adgeV-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCAGCGGGCGTTTTTCCACGCTGCGACTGAGGATGCGCCGCAGGTCGGCGCCGTAGACCCGGAGGATTCCGGTGCGGACGATATGCGTGCCCCACACC AGCAGGGCGACGGCAGAGAGCAGGTCGAGCAGTTTCAGCATGGCGTGGCCCCCCTGGCACTACGACGAATGGCCAACCTCGCGCCAGGTTCCGCGTGCGT TGCGCCGCGGAGCCCGGACAACGGCGCCAACGGCCACGATGGAAAGGCAGCGTTCAGGCGAGTTGTAACACGAACGTCATATTTGGACAGGCGGCCCCCG CGGGAGTTCGTCTCGGCAGCCCGAGCGGCAGGGCGCCTACCCTTCATTCAAGCGTGCGCGCCGGGAAACGGCGAGGATTTTTTCGCCTTCCGTTCGATGC ATGCGTTTGCGCCACAGGCCATGGAATTAGCCGACAGGAAGGGTATCCTTTGCACCTTTTAAAAAGCCCCGGTCTAGAGGGATACAGAGGAGTGGTGCGG
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DNA Sequence for Gene |
>Q006_05690
ATGCGATTTTCGGGGATCAGTGGCTGCCTCTCGGCAGCGGTGTTGGCGCTCGGGGTAGGGGGAGCGCCGGTGGTTCAGGCCGATGCGCTGGGCGATAGCC TGGAGCAGGCGCACATCCGCAAGGCGACCTTCGCCGCGCCGGCCTGGGAAGGCTATACCAACGCCGACGGCAGCGGTCTGTACTGGGACCTGCTGAAGCA GGTCTATGCGCCCTACGGGCTCGACGTGAAATTCATCAACATGCCCTGGAACCGCGCCAACAAGCTGATGACCGCGGGCTCCATGGTCGATGGCGTGCCG GGCGAGATCCCCGGCGTTGAGGGCAAGCTGTACGCCCAGTTGCCGATCGACATCGAGTACCACGGCGTGATGCATGCGGCGAAGACGCCCTTTTCCGGCC GCGCCAGCCTCACCGGCAAGCGCGTCGGCTGGCGCCACAGCTACAACCTGATCCCCGCGGAGCAGCGCGACTTCACCCTGGTCGAGTGCGTCCGCCCCGA GCGTTGCACCGAGCAGGTCCAGAACGGCGAGCTGGATTTCTTCCTCGACGAGCCGGACGAACTGGAAAAGCAGCGCAGCGAAGCGCATCTGCCGGCCGAC GCCTACCCGATCGCGCAACTGCCGCCCGGCAAGGAGTCCTTCATGACCTTCGCCGACAGCGCCAGCGGCCGGCTCCTGCGCGAGGTCTACGACGCGCGGG TACGGCAGATGGCGGCGTCCGGCGAGCTGCGGGCGCTCTACCAGCGCTGGAACAGCGAGGTGCCCGGCGCCGTGCAGGCTCTTTCGGCGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCCGCTCATTTCCATCGCGAAGCCTTTCCGGGGCTTGCGCGGTGGGAATGAAACGCCTAGGATTCGCCCTTCATTTCCCCCACTTACGCACCGCAAA GGAGGTTACATCGATGATTCAGTTCTCTACCCTTTGCAGGCTGCGCCTGGCCTAACGGCCACCGAAACCTACCGCTCGACCCCCTGCACCGCTGAACGAT TCCCGCCCTTGCGTCCGCGCAAGCTTCCGGCGAGAGGTCATCGGCTGCCGCGGTCACCGCTCCCCAGGTTTTCACTTCTCCGTTAGACGCCCTTCGCCCT TCCGCGAGTGCCCGCTCGGCTTCGGTCTGCCCCCCGGATCTACCGTTTCAATCACATGGATTGGATTATGGGCAACTACATCAAGCCTTTGTCCGCGGGC GTCGCACTGATCGCCTCGGACAGCACCTGGATCGAAGGCAAGGCGATCCAGCAACTGCAAACCACCGCCGAACTGGACGGCATGTGCCGCGTCGTCGGTC
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Amino Acid Sequence |
>hypothetical protein
MRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGSMVDGVP GEIPGVEGKLYAQLPIDIEYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPAD AYPIAQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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