Strain | Pseudomonas aeruginosa S54485 genomic scaffold adgfS-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGAAGTCCTCCAGCCGCGGCAGCAGCCAACCGACCGTGAAGGTTCCGACCGCGCCGACGGTGAGCACGTCCCGGTAGTGGCCACCCTCGAAGCGTTC CAGCAGGCCGGCGATGCGGTCGAAGGAGTCACACAGCACCGGCAGCAGGCTCTCGCCCTCGTGGGTCAGCATGAGGCCGCGCGGCAGACGCTTGAACAGG GCCACGCCGAGACGCTCCTCGAGGCTCTTCACCTGGTGGCTGACCGCCGCCTGGGTCACGCACAGCTCGATGGCCGCGCGGGTGAAGCTCAGGTGCCGGG CCGAGGCTTCGAAGGCGCGCAGGGCGTTCAGCGGCAAATGGGGTCGAACCAATCTCTGCTCCAAATTTTTCTAATGGCTGCCGCGAGTATTCGTCGTTTG CCGCAAATCCTGCGCAAGCCTAGATTTTCCCCGCCCGCCGATCAAGGAGCGCTCCCGGGGCGGTTTCTCATGCAGCCAACGACAAAGGACGCCAATCCTC
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DNA Sequence for Gene |
>Q007_03748
ATGCGCGATACCAGATTCCCCTGCCTGTGCGGCATCGCCGCTTCCACACTGCTGTTCGCCACCACCCCGGCCATTGCCGATGAGGCCCCGGCGGATCGCC TGAAGGCACTGGTCGACGCCGCCGTACAACCGGTGATGAAGGCCAATGACATTCCGGGCTTGGCCGTAGCCATCAGCCTGAAAGGAGAACCGCATTACTT CAGCTATGGGCTGGCCTCGAAAGAGGACGGCCGCCGGGTGACGCCGGAGACCCTGTTCGAGATCGGCTCGGTGAGCAAGACCTTCACCGCCACCCTCGCC GGCTATGCCCTGGCCCAGGACAAGATGCGCCTCGACGACCGCGCCAGCCAGCACTGGCCGGCGCTGCAGGGCAGCCGCTTCGACGGCATCAGCCTGCTCG ACCTCGCGACCTATACCGCCGGCGGCTTGCCGCTGCAGTTCCCCGACTCGGTGCAGAAGGACCAGGCACAGATCCGCGACTACTACCGCCAGTGGCAGCC GACCTACGCGCCGGGCAGCCAGCGCCTCTATTCCAACCCGAGCATCGGCCTGTTCGGCTATCTCGCCGCGCGCAGCCTGGGCCAGCCGTTCGAACGGCTC ATGGAGCAGCAATTGTTCCCGGCACTGGGCCTCGAACAGACCCACCTCGACGTGCCCGAGGCGGCGCTGGCGCAGTACGCCCAGGGCTACGGCAAGGACG ACCGCCCGCTACGGGTCGGTCCCGGCCCGCTGGATGCCGAAGGCTACGGGGTGAAGACCAGCGCGGCCGACCTGCTGCGCTTCGTCGATGCCAACCTGCA TCCGGAGCGCCTGGACAGGCCCTGGGCGCAGGCGCTCGATGCCACCCATCGCGGTTACTACAAGGTCGGCGACATGACCCAGGGCCTGGGCTGGGAAGCC TACGACTGGCCGATCTCCCTGAAGCGCCTGCAGGCCGGCAACTCGACGCCGATGGCGCTGCAACCCAGGATCGCCAGGCTGCCCGCGCCACAGGCGCTGG AGGGCCAGCGCCTGCTGAACAAGACCGGCTCCACCAACGGCTTCGGCGCCTACGTGGCGTTCATTCCGGGCCGCGACCTGGGCCTGGTGATCCTGGCCAA CCGCAACTATCCCAATGCCGAGCGGGTGAAGATCGCCTACGCCATCCTCAGCGGCCTGGAGCAGCAGGCCAAGGTGCCGCTGAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCGCTCGCGAGGGCGACGGAGCGTAGCGGCGCGGGACGCCGGTCCTGGCTATGATGGTGCCATGAGCGCTTCCCCGCCCCTCCGCCAGCCCTGCCCG CCCGGCGCCTGCGTCTGCGAACGCGAGCGCCTGGAGGCGCCCGGCGCGGACCGTCGCATCCTCCTCCTGACCCGCCAGGAAGAGCAGCGCCTGGCCGCTC GCCTGGAAGCCCTGCGCAGCCTGGAAGACCTGGAACACCTGCTGCGGCGCATGGAGGAACAACTGGGCATCCGCCTGCGGATCGCCCCGGCCTTCGGCGA GGTGCGCAGCATGCGCGGCATCCGCATGCGCTTCGAGGAGCAGCCGGGGCTCTGCCGCAAGACCCGCCAGGCGATTCCCGCCGCCATCCGCCGCGGCCTG GAGAAGCGCCCGGAAGTCGCCTACGCCCTGCTCAACGCCCACGACCTGCTGCGCGACGCCTGAAGGCACTGAACGACAGGAAGAGGATGTCGCTCAAGAC
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Amino Acid Sequence |
>beta-lactamase
MRDTRFPCLCGIAASTLLFATTPAIADEAPADRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYFSYGLASKEDGRRVTPETLFEIGSVSKTFTATLA GYALAQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERL MEQQLFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRVGPGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWAQALDATHRGYYKVGDMTQGLGWEA YDWPISLKRLQAGNSTPMALQPRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFIPGRDLGLVILANRNYPNAERVKIAYAILSGLEQQAKVPLKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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