Pseudomonas aeruginosa JJ692, Q008_03723

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa JJ692 genomic scaffold adgfu-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGTCCTGGTCGTCGACACCGCCGCCGGAATCGGCGATTCAGTGGTCAGTTTCGTCCGCGCCGCGCAGGAGGTGCTGCTGGTCGTCTGCGACGAGCCGA CCTCGATCACCGATGCCTACGCCCTGATCAAGCTGCTCAACCGCGACCACGGTATGACCCGCTTCCGGGTCCTGGCCAACATGGCCCACAGCCCGCAGGA AGGACGCAACCTGTTCGCCAAACTGACCAAGGTCACTGACCGTTTCCTCGACGTCGCACTACAGTATGTAGGTGTCATCCCTTACGACGAGTCGGTACGC AAGGCCGTGCAGAAACAGCGAGCCGTATACGAGGCATTCCCCCGCTCGAAGGCGTCCCTGGCCTTCAAGGCGGTCGCGCAGAAGGTCGACAGCTGGCCGC TGCCGGCCAACCCGCGCGGGCACCTGGAGTTCTTCGTCGAACGACTGGTCCAACACCCCGCGACAGGTTCGGCCGTATGACAGCGGCCTCTGGAGTGCGT
DNA Sequence for Gene
>Q008_03723
ATGTATAGCAAGGCGCAAGCGCAGAACTCCCAGGAGCAACTGATCCAGCGTTACGCACCACTGGTCAAGCGCATCGCCTATCACCTGCTCGGCCGCCTGC CGGCCAGCGTGCAGGTGGAGGACCTGATGCAGGCCGGCATGATCGGCCTGCTCGAGGCCGCGAAGAAATACGACGCCGGCAAGGGCGCCAGCTTCGAGAC CTATGCCGGCATCCGCATCCGCGGGGCCATGCTCGACGAGGTCCGCAAGGGCGACTGGGCGCCGCGTTCGGTGCACCGCAACACGCGCATGGTGACCGAC GCGATCCGCGCGATCGAGGCGAGAACCGGACGCGACGCTAAAGATCACGAAGTTGCTGCCGAACTCCAATTGAGCCTCGAAGATTACTACGGCATCCTCA GCGACACGCAGGGCAGCCGCCTGTACAGCTTCGACGACCTGTTGCAGGACGGCGAACATGGATTGCCGGAAGACACCAGCCTCAGTCACAACGAACCGAT CCACGGCCTGCTCGACGAACGTTTCCAGGCGGCCCTGGCGGATGCCATCGCCAAGTTGCCGGAGCGCGAGCGCCTGGTGCTGGCGTTGTATTACGACGAG GAACTCAACCTCAAGGAGATCGGCGAGGTACTGGGCGTCAGCGAATCGCGGGTCAGCCAGTTGCACAGCCAGTGCGCCGCGCGTTTGCGTGCGCGCCTGG CCGATTGGCGGTCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGGCCTCGACCGCAGCTTGTAACCGTTAACGCAAAAGAATGTGTGGCGCGTCCCCTGGGGCGCGCTCTGGTCTGTACGGAGGTTTACTTGGACAAGAA CATGAAAATTCTCATCGTGGACGACTTTTCCACGATGAGACGCATCATCAAGAACCTCTTGCGGGACTTGGGCTTCACCAATACCGCCGAGGCCGACGAC GGCACCACGGCGCTGCCGATGCTGCACAGCGGCAATTTCGACTTTCTCGTCACCGACTGGAACATGCCGGGCATGACCGGCATCGATCTGCTGCGCGCGG TTCGCGCCGACGAGCGCCTCAAGCACCTGCCGGTGCTGATGGTCACCGCCGAGGCCAAGCGCGACCAGATCATCGAAGCGGCCCAGGCCGGGGTCAACGG CTATGTGGTCAAACCCTTCACCGCTCAGGTCCTGAAGGAAAAGATCGAGAAGATTTTCGAGCGGGTCAACGGCTGAAGCCGGCCAAGAGGGTGTCATGGT
Amino Acid Sequence
>RNA polymerase sigma 70
MYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLEAAKKYDAGKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTD AIRAIEARTGRDAKDHEVAAELQLSLEDYYGILSDTQGSRLYSFDDLLQDGEHGLPEDTSLSHNEPIHGLLDERFQAALADAIAKLPERERLVLALYYDE ELNLKEIGEVLGVSESRVSQLHSQCAARLRARLADWRSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site