Strain | Pseudomonas aeruginosa JJ692 genomic scaffold adgfu-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCAACCTGCTCGCCGGCCTGCTCACCGGCATGGGCAAGGACGGCGCGCGCGGGCTCCTGGCGATCCGCCAGGCCGGCGGCTACACCCTGGCCCAGGAC GAGGCTACCTGCGTGGTCTACGGCATGCCCCGCGAAGCGGTGGAACTGGGCGCCGCGGAAGACGTGCTGCCGCTCGAACGGATCGCCGCCGCGCTGCTCC AGCAAGCCGCCCGGCGCGGCAGCGGCAACCGCCTCTGAGCGGGATCCTGGCCGGCCCGCTGCGCTTTTTCGCCGCCCCCCGCAACCTCCCCCGCCGAGAC CCCGCCGACGACAGGCCCGAACCACGGGCCTTTGCCTGCTCGCCATCATTGTGACGTCAAATTAATGGCGAAATAAAACCAAATTACGTTGCCTGAAATA ATGCACATCTGCACAATTGGCCCTTTCGCCAAAAGTTCGACACACGCTTTCGATCCATGATTTCGGCCGCGGGCCGGGCGAGAAACTGATAGGGATAGCC
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DNA Sequence for Gene |
>Q008_00137
ATGGCGGCGAACTGGGGGTTGCGCGGCAAATCGGTGGTGGCGCTGTTGCTGGCCTGTGCCCTGGCACTGGTCCCGGCGGTGCTGCTGGGCTGGCGCGCGA TGGACGACATCCGTACGCACTTCGGCCTGGCCTACGCGAAGAACTTCACCCTGCTGCACCGGCAGAAGATCCTCGCCCCGGTCTCCCGCGAACTGGCGTT GTCGCGCCGTTTCGCCGAATCGGTGGTGACCCGCGACTGGCTGCTGAAGGAAGACGACCCGGCGCGCCGCGCGCTGTTCTTCCGCGAGGCCGAGGGCTAC CGCGGCGACTTCCGCGACCACGCCTACTTCATCATCGCCAGCGGCTCCCAGCACTACTACTTCAACGACGGCAGCCAACCCTACAGCGAACGGCCGCGCT ACACCCTGGAGGCCGGCGACCCGGAAGACGCCTGGTACTTCAATACCCTGCGCAACAGCGCCGCCTACAACATCAACGTCAATGTCGACAGCAAGTTGAA CCTGACCAAGGTCTGGTTCAACCTGGTGATCCGCGACCAGGGCCGGCCCATCGGCCTGGCCGGCAGCGGCCTGGACCTGAGCGGCTTCCTCGACGACTTC ATCATCGCCCGCGAGCCGGGCGTGACGCCGATGATCGTCGGCGACGACGGCGCCATCCAGGCCCACCCGGACCGCCGCCTGATCGCCTACAGCTCCGCCG CCGGCGGCGCCAGCGAACGCCACCGGGTGTTCGACCTGCTCGACCAGCCGGAACAGCGCGACGCCCTGCGCGAGGCCATGCGCCTGGCCCGCGCCAAGGC CGGCTCGGTGCACTGCCTGTGGGCCGGCCTCGACGGCCGCCAGCAACTCTTCGCCGTGGCCTACATTCCCCAACTGCGCTGGTACGTGCTCACCGCCGTC GACCTGCACGCCGCCCAGGTCCTCGACAACCGCTGGCTTTGGCCGCTGGCGGGCACGTTCCTGCTGTTGCTGGTGGCCCTGCTGCTGGGCTTCGCCTATG CCGTCGAGCGCCTGCTGTTGCGCCCCCTGCGCAGCCTCAAGCGCTCGGCCAAGGCGATCGCCGCCGGGCGCTACGACACGCCGCTGCCGCTGGCGCGCCA GGACGAGATCGGCTCGCTGTCGAAGGCCTTCGCCAGCATGGCCGACCAGGTCCGCCGGCACACCGCCGAGCTGGAAGACAAGGTCCAGGAGCGCACCCAG GCGCTGGAGGAAGCCAACCGCGAGATGGCCGCCGCGCAGAAGAAGATCGGCGACAGCCTCGACTATGCCAGCCTGATCCAGCGCGCGATCCTCCCCGACC GCCAGCTCAGCGCCACGCTCGGTGAGCATCACTTCATCCTGTGGAAACCGCGCGACGTGGTCGGCGGCGACTTCTACGTGTACCGCGAGCAGGCCGACGG CTACCTGATCGGCGTGGTCGACTGCGCCGGTCACGGCGTGCCCGGCGCGCTGATGACCATGCTCGCCCGCGCCGCCATCGACCACGCCATCGAGGCGGTG GGCAGCCGCGACCCGGCGGCGATCCTCGGCGAGACCGACCAGGCGATGCGCAGCATGCTCAGCCAGGAGCAGATCCCCCAGGCGCTGGCCACCAACATGG ATGCCGGGCTGGTCTGGGTCGACCGCCGGCGCCGCCAGCTGGCCTTCGCCGGGGCGAAGATCTCGCTGTACGCCAGCGACGGCGAGGAGGTCCAGGAACT CAAGGGCGCGCGCCGGGCGATCGGCGACAAGCGCCGTGGCGACTACCGCAACATCGAGGTACCGCTGGCGCCGGGCTGGACCTTCTACCTGAGCACCGAC GGTTTCCTCGACCAGGCCGGCGGCGAACACGGCTTCGGCTTCGGCAGCCGGCGCTTCGCCGACATGCTCCGCGACCACGCGCGGCAGCCGCTCCCCGAGC AGGCCGAGGCCTTCGTGGCGACGCTCGCCGAGTACCAGGGCGAGCACCCGCAACGCGACGACATCACCATCCTGTCCTTCCGATTCGATTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGCACCCATGGAAACGCTAGACCTGCTGGCCATGCGTGAAAGCTACACCCGCCAACGCATCCTGCTCTGCTTCAACGGACCGATCTCGCGCAGCCTGAT CGAGGAGATAGGCCACGCGCTGCGCAACTACCTGCACGCCGAACAGGCCAAGCCGAGCGAAGCGATGGACGTCTTCGCGGTGTACATCGAGATGACCCAG AACATCCGCCACTACGCCAATCTCAAGGGCTACGGCGAACACGAGGCGGCGGCCACGGTAGCCATCGCCCGCAACGAGGACGGCCACTACGTGGTGTCCG CCGGCAACCTGGTGGAGCGCGACGACGGCCAGAGCCTGGTGCGCAGCATCCAGGCCATCGCCAACCTCGACAAGGCCGCCCTCAAGGCCGCCTACAAGGA GCAGCTACGCCGCCCGCGCGACAGCGGCTGCGCCAGCGGAGCCGGTCTCGGCCTGCTGGACATCGCCCGCAAGTCCAGCGAACCACTGGCCGCATCGCTG
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Amino Acid Sequence |
>histidine kinase
MAANWGLRGKSVVALLLACALALVPAVLLGWRAMDDIRTHFGLAYAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGY RGDFRDHAYFIIASGSQHYYFNDGSQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDF IIAREPGVTPMIVGDDGAIQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQQLFAVAYIPQLRWYVLTAV DLHAAQVLDNRWLWPLAGTFLLLLVALLLGFAYAVERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERTQ ALEEANREMAAAQKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDFYVYREQADGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAV GSRDPAAILGETDQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQELKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTD GFLDQAGGEHGFGFGSRRFADMLRDHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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