Pseudomonas aeruginosa U2504, Q009_05766

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa U2504 genomic scaffold adgfx-supercont1.5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGACCTGCCGCTGTTCATGCCGATCGGCGCGCACAAGAGCGACTTCACCCTGGAGGACAGCGCGCCGGTCATGCAGGTGCGCTGCCTCGCCGGACCGA GCCGGCCGCGCGCCAGCCGTGCCCACGATGCCAGCGCCTGGCGGCTGATCAGCCAGCTGTCGCTGAACTACCTGTCGTTGGCCGAGCGCGGCCAGGGCGC CGCCGCCCTGCGCGAGCTGCTGCGGCTCTACGGCGACAGCGGCGATCCGGCGCTGCAACTGCAGATCGAGGGCCTGCGCGAGGTCAGCAGCAAGCCTTGC ACGCGGCGCCTGCCGATGCCCGGGCCGATCGTCTTCGGCCGTGGCCTGGAGATCACCCTGGACTTCGACGAGAACGCGTTCCGCGGCACCGGGGTGTTCC TCCTCGGCGCCGTGTTCGAGCGCTTCCTGGCACGCTACGTGTCGATCAACAGCTTTACCGAGACGGTGCTGCGCACCGGCGAACGGGGCGAGGTGATGAG
DNA Sequence for Gene
>Q009_05766
ATGGCAGGCGAAGCCGGGCAGCCGTCCGAACCTCTGAACCTGCTCGCCGGGATGGCGGCGGCGCCCTGGGACTATGACTTCTTCCAGGCGCTGCGGCGCA TCGAGTGCGAGTCGCCGCAACTGCCGCGCCTCGGTCATTCGGTGCGGCTGGCGGACGATCCGCTGCGCCTCGGGCAGAAGCCCGACTGTACCTTCGCGCC TTCGACCCTGGCCTCGGTGAGCCACACCGGCACCGCCGCGACGCCGCGCCTGGACCAGTTCTTCTTCGGCCTCACCGGCCCCAACGGGCCGCTGCCGCTG CACCTCACCGAATACGCCCGGGAACGCCAGCGCAACGTCAACGACGCGACCTTCAAGCGCTTCATGGACGTCTTCCACCACCGCCTGCTGACCCTGTTCT ACCGGGCCTGGGCGGAGGCGCGGCCGGAGATCAGCCACGACCGGATCGACGACGACTACTGGTCGGCGCGCCTCGCCGCGCTCTCCGGGCGCGGCATGCC GAGCCTGCGGGGGCGCGAGCCGCTGGCGGACACCGCGCGCTACTACTACACCGGCCACCTCGCCGCGCAGACCCGCTACCCGGACGGCCTGCGGGTGATC CTCGCGGAGTATTTCGAGGTCCCGGTGGCGGTCGAGGAATACGTCGGCCAATGGCTGGAGCTGCCCGAGCGCAGCCGCCTCGGCGTCGACTCGACGAGCC TGGGCATGGACGTCTGCCTGGGCACCCACGTCTGGGACCGCCAGCACAAGTTCCGCCTGCGCCTGGGGCCGCTGGACCTCGATCAATACCAGCGCTTCCT GCCCGACGGCGACCACTTCGTCGAGCTGGCCGCCTGGGTCGCCGAATACCTGGGCGAGGAGCTGGACTGGGACGTCAACCTGGTCCTGCAACGCCACGAA GTACCCCCGCTGGGCCTGCAGGGCGGCGGGCGGCTCGGTTTCAACACCTGGCTGGGCGATCCCGGCCAGGACGCCAGGGATCTACTGCTGGCCCGCCAGT ACGCCACTGCGCGGCCGCACGAGCACAAGGAGAAGGAACATGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCAGTCGCGTTGCGCTGTTCGGCAAGCTGAACAGCCTGGCCTACAAGGCCATCGAGGCCGCCACGGTATTCTGCAAGCTGCGCGGCAATCCCTATGTC GAGCTGGTGCACTGGTTCCACCAGATCCTCCAGTTGCCGGACTCGGACCTGCACCAGATCGTCCGCCAGTCCGGGATCGACCCGGCGCGCCTGGCCAAGG ACCTGACCGAGGCCCTCGACCGCCTGCCGCGCGGCTCGACCTCGATCACCGACCTGTCCTCCCATGTCGAGGAAGCGGTGGAGCGCGGCTGGGTCTATGG CAGCCTGATGTTCGGCGAGAGCCAGGTGCGCACCGGCTACCTGGTGATCGGCATCCTCAAGACGCTGAGCCTGCGCCATGCCCTCACCGGGCTGTCGGCG GAATTCGCCAAGCTCAAGGTCGAGGCGCTCACCGAGCGCTTCGACGAGTACGTCGGCGCCTCGCCGGAGAACGGCCTGTCGGCCAGCGACGGCTTCAACG
Amino Acid Sequence
>type VI secretion protein
MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDPLRLGQKPDCTFAPSTLASVSHTGTAATPRLDQFFFGLTGPNGPLPL HLTEYARERQRNVNDATFKRFMDVFHHRLLTLFYRAWAEARPEISHDRIDDDYWSARLAALSGRGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVI LAEYFEVPVAVEEYVGQWLELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDWDVNLVLQRHE VPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQYATARPHEHKEKEHE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site