Strain | Pseudomonas aeruginosa U2504 genomic scaffold adgfx-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGAGTCCTGAACCCCCGGCCCCGTTATCCCTGGCGGGTCGCTCGCCGGGGCAACGCATGCGTTGCCTGTTTCCGACTCGCCCCACAAGGACCAACTGCAC CTGCAACTGGGTGTGGGCCTGAGCGCGGAGCAGATGGCGGCGCTGACCCACGACATCGTGTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCG CGCCGGTGGTCTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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DNA Sequence for Gene |
>Q009_05714
CGTCGCGGCTACAGAGCGTGACCCAGCTCGGCGCCGAAGTCAGTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGC CCTCGAAGCGCGCCGCGACATCGCCCTCTCCGCCGGGCGTGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTC ACCTACCAGGAAGACAAGGTCGCCCAGCAAGGCACCCGCGTGGACGCCGGCGGCGATCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCC AGGCCAGCGCCGGCGACGAGGCCTACCTGGTGGCCGGCGACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAA AGGCGACTTCGGCCGCAAGGAAACCCGGCGCGACGAAGTCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGC GGCGGCGACCAGACCTACCAGGGCGCGAAGCTGGAATCAGGGAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGACCTGC ACCAGGAGAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGAGCCAGATCGTCGC CCAGGGGAATCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAG GCGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACT CGGGGTTGGGGGCTGCGCCGTCACTGGCCATTGCCATCGTTGCGGCTGCTTACCTGGGGCCCGTTTATGGCGCAATGGCCAGCAATCTTGCGACTGGGAC CATAAACAATGGCGGTGACTTCGGAAAGGGGCTGAAGTTTGCGACGAGCTCCAATGCTTTGAAGGGATATGCCGTTGCGGGTGCGACAGCTTATTTGGTC AGTCCGCAACTGGATGAGATGTTTGGTGTAAGCACCGACAACGTCAATAAAGTCACTAAAGGATTTGACCTGAGCACTATGAGTGGTCTAGGTGGGTTCG CCACCTATTCTATCATTCAAGGTCTCTCTCAAGCGGGTATTCAAACTGCCGCGTTTGGTGGAAGTTTTGCAGACAACTTAGGTGATGCAATGGCCGGTCA AGCAACAAACTTGGCTATGGCTGCTGGGTTCAATCTCATCGGTGATTGGGCTGATGGAAAGTTTGATTCTGGCTCTCCGCAAAAAATTATGGCGCATGCC TTGATGGGAGGATTGCTCGCCCAAGCAACAGGTGGAGACTTCAAAACTGGAGCTATGGCAGCAGGGGCTAACGAAGCGCTTGTCAATGTGCTGTCTAACA TGGCCGGTGGCGAAGAAAAGCTAGAGCTTATGGCCTCACAGCTAACAGGTCTTCTTGCTGCTACTGTAGTTGATGGAGATGTTGCGAAAGGGGCAGAGAT TGCCAAGAACGCAACGGCCTACAATCAGCAGGTTCACCGGGACGCTCTGAGTCGACTGAAAAGAGGAATGAGTGCGCTTCATGAACAAGGCAAGTATGCT GATCTTGAGCCGGAGATAGTGCTTGCTGAGCTGCAAAAAATAGCCAGTGGCGAAGCCAAAAGCGTTTCGGATTTGAACCCGAAAGTGGTTCAGTTTCTGA ATAGTGAATTTTCTCCTGCGAGCCTGAGAGAAACGTTGTTCGAGCCGGAGTCCTGGGAAGAATATGCTGCGATAGCCGTCGACGTACTTTATCCAACGCC TGGGGGGAAGGCAGCAGCTATTGAGAAGGCAGGTGGTAAGCTGTCTAAAGAGGCGTTGGAAGCTCTGGAGAAGAAGTTTTCTGAAAGCACTAAACAGGAG CTTAAGTCAAAACTTTTACAGGAAGACCCAAGGAATCTAATTCCTACTCAGACTAAGGCCGAAATGTCAGGCTCGCAGATTAAAAGGATTGTGAAAAGCA TTAAGGAGAACGGATTTGATCAAGAAAAACCAGTAGACGTTTGGCGTAATCCAAAAACCGGGCGCCTTGAAATTCAAGATGGACATCATCGAACGGAGGC AGCAAAGAAGGCCGGATTAGATAAAATACCTGTAAGCATATGGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATACTTGTGGCTAGATATTCGGTGGCTTTTGCATTACCTATCGGGACAGATGTTAGTTTTTCAGAGGATGGGTGGGAGTTTAAATCTCCCGCCCCTCTAT CTTTAAATGTTAAGTCTGAATTTATTTCGAAATTTAACCTTGAGCTTGTAGAGTGCTATTCTGGAGTAGAGAAATTTTCCGTTGACGGGCTGGAGTTTTT GGTTTTTTATAGTGATCTGCACGCTATAGAGTATATTTATTTTAAAATATATGATAAATCTTTTCTGGTTAAACTGAGGGAATATTGGAGTAATAATTTA AGAGATTATTGTTATTTATTCTTTCCCGGAGAATAATTTGTTGCTACCATAAGTGGGTGGGTTTATTCTTGGCACTCTAAAACTAAAAGGTAGGTTTCCC CGTTCAGTAATTCCTTGCTCTTTAACAATTTACATTTTCGATTTAGAAGAAGAGCACCGTGCAAGACCTCCCTGTCGCCACATCCGCAGAGTCCTGAACC
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Amino Acid Sequence |
>hypothetical protein
SRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAGGDLAINAGQDLRLIASQ ASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDLH QESHEKSKGDLAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNS GLGAAPSLAIAIVAAAYLGPVYGAMASNLATGTINNGGDFGKGLKFATSSNALKGYAVAGATAYLVSPQLDEMFGVSTDNVNKVTKGFDLSTMSGLGGFA TYSIIQGLSQAGIQTAAFGGSFADNLGDAMAGQATNLAMAAGFNLIGDWADGKFDSGSPQKIMAHALMGGLLAQATGGDFKTGAMAAGANEALVNVLSNM AGGEEKLELMASQLTGLLAATVVDGDVAKGAEIAKNATAYNQQVHRDALSRLKRGMSALHEQGKYADLEPEIVLAELQKIASGEAKSVSDLNPKVVQFLN SEFSPASLRETLFEPESWEEYAAIAVDVLYPTPGGKAAAIEKAGGKLSKEALEALEKKFSESTKQELKSKLLQEDPRNLIPTQTKAEMSGSQIKRIVKSI KENGFDQEKPVDVWRNPKTGRLEIQDGHHRTEAAKKAGLDKIPVSIWE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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