Strain | Pseudomonas aeruginosa U2504 genomic scaffold adgfx-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCAGCGGGCGTTTTTCCACGCTGCGACTGAGGATGCGCCGCAGGTCGGCGCCGTAGACCCGGAGGATTCCGGTGCGGACGATATGCGTGCCCCACACC AGCAGGGCGACGGCAGAGAGCAGGTCGAGCAGTTTCAGCATGGCGTGGCCCCCCTGGCACTACGACGAATGGCCAACCTCGCGCCAGGTTCCGCGTGCGT TGCGCCGCGGAGCCCGGACAACGGCGCCAACGGCCACGATGGAAAGGCAGCGTTCAGGCGAGTTGTAACACGAACGTCATATTTGGACAGGCGCCCCCCG CGGGAGTTCGTCTCGGCAGCCCGAGCGGCAGGGCGCCTACCCTTCATTCAAGCGTGCGCGCCGGGAAACGGCGAGGATTTTTTCGCCTTCCGTTCGATGC ATGCGTTTGCGCCACAGGCCATGGAATTAGCCGACAGGAAGGGTATCCTTTGCACCTTTTAAAAAGCCCCGGTCTAGAGGGATACAGAGGAGTGGTGCGG
|
|
DNA Sequence for Gene |
>Q009_05214
ATGCGATTTTCGGGGATCAGTGGCTGCCTCTCGGCAGCGGTGTTGGCGCTCGGGGTAGGGGGAGCGCCGGTGGTTCAGGCCGATGCGCTGGGCGATAGCC TGGAGCAGGCGCACATCCGCAAGGCGACCTTCGCCGCGCCGGCCTGGGAAGGCTATACCAACGCCGACGGCAGCGGTCTGTACTGGGACCTGCTGAAGCA GGTCTATGCGCCCTACGGGCTCGACGTGAAATTCATCAACATGCCCTGGAACCGCGCCAACAAGCTGATGACCGCGGGCTCCATGGTCGATGGCGTGCCG GGCGAGATCCCCGGCGTTGAGGGCAAGCTGTACGCCCAGTTGCCGATCGACATCGAGTACCACGGCGTGATGCATGCGGCGAAGACGCCGTTCTCCGGCC GCGCCAGCCTCACCGGCAAGCGCGTCGGCTGGCGCCACAGCTACAACCTGATCCCCGCGGAGCAGCGCGACTTCACCCTGGTCGAGTGCGTCCGCCCCGA GCGTTGCACCGAGCAGGTCCAGAACGGCGAGCTGGATTTCTTCCTCGACGAGCCGGACGAACTGGAAAAGCAGCGCAGCGAAGCGCATCTGCCGGCCGAC GCCTACCCGATCGCGCAACTGCCGCCCGGCAAGGAGTCCTTCATGACCTTCGCCGACAGCGCCAGCGGCCGGCTCCTGCGCGAGGTCTACGACGCGCGGG TGCGGCAGATGGCGGCGTCCGGCGAGCTGCGGGCGCTCTACCAGCGCTGGAACAGCGAGGTGCCCGGCGCCGTGCAGGCTCTTTCGGCGCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGCGCCGCTCATTTCCATCGCGAAGCCTTTCCGGGGCTTGCGCGGTGGGAATGAAACGCCTAGGATTCGCCCTTCATTTCCCCCACTTACGCACCGCAAA GGAGGTTACATCGATGATTCAGTTCTCTACCCTTTGCAGGCTGCGCCTGGCCTAACGGCCACCGAAACCTACCGCTCGACCCCCTGCACCGCTGAACGAT TCCCGCCCTTGCGTCCGCGCAAGCTTCCGGCGAGAGGTCATCGGCTGCCGCGGTCACCGCTCCCCAGGTTTTCACTTCTCCGTTAGACGCCCTTCGCCCT TCCGCGAGTGCCCGCTCGGCTTCGGTCTGCCCCCCGGATCTACCGTTTCAATCACATGGATTGGATTATGGGCAACTACATCAAGCCTTTGTCCGCGGGC GTCGCACTGATCGCCTCGGACAGCACCTGGATCGAAGGCAAGGCGATCCAGCAACTGCAAACCACCGCCGAGCTGGACGGCATGTGCCGCGTCGTCGGTC
|
|
Amino Acid Sequence |
>hypothetical protein
MRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGSMVDGVP GEIPGVEGKLYAQLPIDIEYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPAD AYPIAQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|