Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCATCCGCTGGCCGCGCCCTTCTCCATCGAACGCTTCCACAGCGGTGCACTGATCGACGAGCACGGCGCGGCGGCAGTGGCGCACTGAAAAAAGCCGC CCGAAGGGCGAAATCCGCTGCCCCTCGCCCTTCAGGGAGAGGGTGCCGGTCAACCGGCAAGAACAGTTTCCGGAGGCTACAAAATGCTGAATATCTTCTG CCCCCACTGCGGCGAACTGCGTTCCGAAGAGGAATTCCACGCCAAGGGTCAGGCCCACATCCCGCGCCCGCTCGACCCGAACGCCTGCAGCGACGAGGAA TGGGGCGACTACATGTTCTTCCGCGACAACCCGCGCGGCCTCCATCACGAGCTGTGGGTGCACGCCGCCGGCTGCCGCAAGTACTTCAACGTCACCCGCC ATACGGTGACCTACGAGATCCTCGAGACCTACCTGATCGGCGAGCAGCCCAGCGTCGTCGCCGACGGTGAGAAGAAACCCGCCGTACAAGGGGAACCGGC
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DNA Sequence for Gene |
>Q010_05862
ATGAGCCAGATCAATCGCCTGTCCAGCGGCGGCCGCATCGACCGCAACCGCCCGCTGACCTTCAGCTTCAACGGCCAGCACTACCAGGGCTATGCCGGCG ACACCCTGGCCGCCGCGCTGCTGGCCAACGGCGTCGACATCGTCGGCCGCAGCTTCAAGTACTCGCGGGCGCGCGGCATCGTCGCCGCCGGCGCCGAGGA GCCCAACGCGATCCTGCAGATCGGCTCCCGCGAAGCCACCCAGATCCCCAACGTGCGCGCCACCCAGCAGGCGCTCTACGGCGGCCTGGTGGCCACCAGC ACCAACGGCTGGCCGAACGTGCAGAACGACCTGATGGGAATCTTCGGCAAGGTCGGCGGCAAGCTGATGCCGCCCGGTTTCTACTACAAGACCTTCATGT ACCCGCAGTCGATGTGGATGACCTACGAGAAGTACATCCGCAAGGCCGCCGGCCTGGGCCGCGCGCCGACCGAGGTCGATCCGGACAGCTACGACTGGAT GAACCACCACTGCGACGTGCTGGTGGTCGGCGCCGGCCCGGCCGGCCTGGCTGCCGCCCTCGCCGCCGCTCGCAGCGGCGCGCGGGTGATCCTCGCCGAC GAGCAGGAAGAGTTCGGCGGCAGCCTGCTGGACACCCGCGAGACCCTCGACGGCAAGCCCGCCGCCGAGTGGGTCGCGGACGCCGTGGCCGAGCTGCAAG GCCTGCCGGAGGTCATCCTGCTGCCGCGCTCCACGGTCAACGGCTACCACGACCACAACTTCCTCACCATCCACGAGCGGCGCACCGACCACCTCGGCGA GGTCGCCCCGCTCGGCCAGGTCCGCCAGCGCGTGCACCGCGTGCGCGCCAAGCGCGTGGTACTGGCCGCCGGCGCCCATGAGCGGCCGCTGGTCTACGGC AACAACGACCTGCCCGGCAACATGCTCGCCGGCGCGGTTTCCACCTATGTACGGCGCTACGGCGTGGCACCGGGCAAGAAACTGGTGCTGGCCACCAACA ACGACTACGCCTACCGCGTCGCCCTCGACTGGCAGGAAGCCGGCCTGCAAGTGGTGGCCATCGCCGACGCCAGGGCCAATCCGCGCGGCGAGTGGGTCGA GGAAGCACGCCAACGCGGTATGCGGGTGATCACCGGCAGTTCGGTGATCGAGGCTCGCGGCGGCAAGCGGGTCAGCGGCGCCAAGGTCGCCCGGATCGAC CTGCAGGCCATGCGCGCCAGCGGCGGCGAATGGCTGGACTGCGACCTGATCGCCAGCTCCGGCGGCTACAGCCCGGTCGTGCACCTGGCCTCGCACCTGG GTGGCAAGCCGGAATGGCGCGAGGAAATCCTCGCCTTCGTCCCCGGCGAAGGCCTGCAGAAACGCATCTGCGCCGGCGCCGTGAACGGCGTGTTCGGGCT CGCCGAGGTGCTCGCCGACGGCTACCAGGCCGGGAGCCGCGCCGCCCTCGACGCCGGCTACAAGACCGCCGCCGGCAGCCTGCCGAAGGTCCAGCCGCGC CGCGAGGAAGCGCCCGTCGCGCTGTTCCAGGTGCCCCACGAGAAGCCCACGGCGCGCGCGCCGAAGCAGTTCGTCGATCCGCAGAACGACGTCACCGCCG CCGCCATCGAACTGGCCTGCCGCGAGGGCTTCGAGTCCATCGAGCACGTCAAGCGCTACACCGCGCTGGGCTTCGGCACCGACCAGGGCAAGCTGGGCAA CATCAACGGTCTGGCGATCGCCGCGCGGGCCCAGGGCAAGAGCATCGCCGACACCGGCACCACCATGTTCCGCCCGAACTACACCCCGGTGACCTTCGGC GCCGTCGCCGGCCGCCACTGCGGGCACCTGTTCGAACCGGTGCGTTTCACCGCCCTGCACGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAGGACGTCG GCCAGTGGAAGCGGCCGTGGTACTTCCCGCGCCGCGGCGAGGACATGCACGCCGCCGTGGCCCGCGAATGCCGCGCGGTGCGCGAGGCGGTCGGCCTGCT CGACGCCTCGACCCTGGGCAAGATCGACATCCAGGGCCCGGACGCGCGGGAGTTCCTCAACCGGGTCTACACCAACGCCTGGACCAAGCTCGACGTCGGC AAGGCGCGCTACGGCCTGATGTGCAAGGAAGACGGGATGGTCTTCGACGACGGCGTGACCGCCTGCCTGGCCGACAACCACTTCGTCATGACCACCACCA CCGGCGGCGCCGCCCGCGTACTGGAGTGGCTGGAGCTGTACCACCAGACCGAATGGCCGGAGCTGAAGGTGTACTTCACCTCGGTCACCGACCACTACGC GACCCTCACCCTGTCCGGCCCGAACAGCCGCAAGCTGCTCGCCGAGGTCACCGACATCGACCTGGACAAGGATGCCTTCCCCTTCATGACCTGGAAGGAA GGCAAGGTCGCCGGGGTGCCGGCGCGGGTGTTCCGCATCTCCTTCACCGGCGAGCTGAGCTACGAGGTGAACGTCCAGGCCGACTACGCCATGGGCGTGC TCGAAGCGCTCGCCGAGCACGGCGCGAAGTACGGCCTGACGCCCTACGGCACCGAGACCATGCACGTCCTGCGCGCCGAGAAGGGCTTCATCATCGTCGG CCAGGACACCGATGCCTCGGTCACCCCGGACGATCTCAACATGGGCTGGGCGGTGGGCCGCAGCAAGCCGTTCTCCTGGATCGGCTGGCGCGGCATGAAC CGCGCCGACTGCCTGCGCGAGGATCGCAAGCAACTGGTCGGACTCAGGCCGAGCAACCCGCAGGAGGTACTGCCCGAAGGCGCGCAACTGGTGTTCGACA CCCAGCAGGCGATCCCGATGAAGATGGTCGGCCACGTCACCTCCAGCTACATGAGCGCCAGCCTCGGCCACGGCTTCGCCCTGGCGGTGGTGAAAGGCGG CCTCAAGCGCATGGGCCAGAAGGTCTACGCGCCGCTGGCGGACGGCCGCTTCATCGAGGCGGAGATCTGCTCCTCGGTGTTCTACGACCCCAAAGGGGAG CGGCAGAACGTGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGAGAGGGATGCGCTCCTCTCCCCGGCCCTCTTCCCGAAGGGAGAAGGCAGACAGGCTACCAGGGCGCTCGGCGCCCCAAGGTGAAAACGAATGAGCA AGGCAAACGTCTACCAGCAACGCCCCGAACCCGGCGTCCACGCCGAATCGCCGCTGCACCATGCCGAGCTGCACAAGCTCGCCGGCAAGACCGCCGCGAA GGCCGGTATCGTCCTGCGCGAGAAGAAGCTGCTCGGCCACCTGGTGCTGCGCGGCGATGCCGCCGACCCGGCCTTCGCCGCCGCCGTGCACCAGGCCCTC GGCCTGGAACTGCCGGTGGCCCTGACCCTGGTCGCCAGCGGCGAGACCTCGCTGCAATGGCTGGCCCCGGACGAATGGTTGCTGATCGTCCCCGGCGGCG AGGAATACGCCGTCGAACAGCGCCTGCGCCAGGCCCTGGGCGAGGAGCTGCACTACGCGGTGGTCAACGTCAGCGGCGGGCAGACGCTGCTCGAACTGAG
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Amino Acid Sequence |
>sarcosine oxidase alpha subunit
MSQINRLSSGGRIDRNRPLTFSFNGQHYQGYAGDTLAAALLANGVDIVGRSFKYSRARGIVAAGAEEPNAILQIGSREATQIPNVRATQQALYGGLVATS TNGWPNVQNDLMGIFGKVGGKLMPPGFYYKTFMYPQSMWMTYEKYIRKAAGLGRAPTEVDPDSYDWMNHHCDVLVVGAGPAGLAAALAAARSGARVILAD EQEEFGGSLLDTRETLDGKPAAEWVADAVAELQGLPEVILLPRSTVNGYHDHNFLTIHERRTDHLGEVAPLGQVRQRVHRVRAKRVVLAAGAHERPLVYG NNDLPGNMLAGAVSTYVRRYGVAPGKKLVLATNNDYAYRVALDWQEAGLQVVAIADARANPRGEWVEEARQRGMRVITGSSVIEARGGKRVSGAKVARID LQAMRASGGEWLDCDLIASSGGYSPVVHLASHLGGKPEWREEILAFVPGEGLQKRICAGAVNGVFGLAEVLADGYQAGSRAALDAGYKTAAGSLPKVQPR REEAPVALFQVPHEKPTARAPKQFVDPQNDVTAAAIELACREGFESIEHVKRYTALGFGTDQGKLGNINGLAIAARAQGKSIADTGTTMFRPNYTPVTFG AVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPRRGEDMHAAVARECRAVREAVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVG KARYGLMCKEDGMVFDDGVTACLADNHFVMTTTTGGAARVLEWLELYHQTEWPELKVYFTSVTDHYATLTLSGPNSRKLLAEVTDIDLDKDAFPFMTWKE GKVAGVPARVFRISFTGELSYEVNVQADYAMGVLEALAEHGAKYGLTPYGTETMHVLRAEKGFIIVGQDTDASVTPDDLNMGWAVGRSKPFSWIGWRGMN RADCLREDRKQLVGLRPSNPQEVLPEGAQLVFDTQQAIPMKMVGHVTSSYMSASLGHGFALAVVKGGLKRMGQKVYAPLADGRFIEAEICSSVFYDPKGE RQNVD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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