Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGCGTCGGAGATCGGGCCGGTGACCAGCAGGCCAAGGGCGAGCATGGCGGTGGCGACGGACAATGCCAGGCTGCTTTCCGCGGCGCTGATGGAAAACGC CTTGGACAGCACCGGCATCATCGGCTGGATGCAGTAGAGCAGGGCAAAGGTGGCGAAACCGCCGGAGAACAGCGCCAGGGAGGTGCGCATGAACTGCGGG GTGCCTTTTTCGATATAGCGTTCGACTTCGGTGGCGGCTTCCAGCACCTCGTTGGCTGCTTCGCGGGCCGCCTCGATTAACGCGGGTTCTTCTTCGGCCT GTGGCCGGACTTGCGGATTGCTCACGGGGCACCTCTGGGGACGGTGGCGAGCAGGCACAACGAGGCCGCGCCACCTGGATTTCAGGGACAAGGGGTCGTT GTTGGAGGTTATGTGGCAAAGGATATAGATAGGTTTATATGATTTCCAATATATTGATCGACACGATTGATATGTAAAAAGACCTAATAGGAGGGGCCGC
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DNA Sequence for Gene |
>Q010_04600
TTGGAACTCAGGCACCTGCGCTATTTCATCGCCGTCGCCGAGGAGCTGCACTTCGGCCGCGCCGCCGAGCGTCTGGGGATCTCCCAGCCGCCGTTGAGCC AGCAGATCCAGGCGCTGGAGGAGGAAATCGGTGCGCGCCTGTTCGAGCGCACCAACCGCCGCGTCGAACTCACCGACGCCGGCCGACTGTTCCTCGACGA GTCCCGCCAGGTGCTGGCCCAGGTAGACAAGGCGGTGCTGCTGGCGCGTCGCGCCCACCTGGGGGAACTGGGCGAGCTGAAGATCGGTTTCACTTCCTCG GCACCCTTCACCTCGACCATACCCAGCAGCATCCATGCCTTCCGCAAGGCCTATCCGGACGTACACCTCGACCTGCAGGAAATGAGCAGCCGCCAGGTAC TCAAGGCGCTGCTCGAGGAAAGCCTGCAGGTGGGCGTGATCCGCCCGCTGGCGCTGCCGGATGCGGTGCATTGGGTGGAGTTGTTCCGCGAACCGCTGGT GGCGGTGCTGCGGGCCGACCATCCACTGGCGGCCGGCAGCGAGGATGGCCTGGCCATCGCCGCCCTGGCCGAGGAGCCCTTCGTGTTCTTCCCGCGCAGC TACGGCACCGGGCTCTACGACCAGGTCATCGCCCTGACCCGACAGGCCGGCTTCAGCCCGCGCATCGCCCAGGAGGCCAGCGAGGCGATGACCATCATCG GCCTGGTCTCGGCCGGACTGGGGGTGTCGATCCTGCCGGCGTCGTTCCGCCGCACCCGGGTCGACGGCGTGGTCTACCGCACCCTGAGCGATCCCGAGGC GACGACTGCGGTATGGCTGGTCCGCCGGCAGAACGAGGGCTCGCCGCTGGCGCTGTCCTTCATCGACCTGGTGACCCGCGAGGCGGCCAGCCTGCGCCGG CGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCGCTCTACGTCAGGACCGAGACGGCGCTCGCGCTTGCCCGCGGCTTTGCCTATCATCCGGGATCAGGCTCGGCTCACGGAGATTTCCCATGCGGCGCG TGGTGTTCAATCAGAAAGGCGGGGTAGGCAAGTCCAGCATCGCCTGCAACCTGGCGGCGGTCAGCGCGGCGGAGGGCTATCGCACCCTGCTGGTGGACCT GGACGCCCAGGCCAACTCCACGCACTACCTGACCGGACTGACCGGCGAGGACCTGCCGGTGGGGATCGCCGACTTCTTCAAGCAGACCTTGTCTTCCGGG CCCTTCAGCAAGAAGGGCAGGGTCGACATCTACGAGACGCCGTTCGACAACCTGCACATCGTCACCTCCAGCCCCGAACTGGCCGACCTGCAGCCGAAGC TGGAGTCGAAGCACAAGATCAACAAGCTGCGCAAATTGCTGGACGAACTGGACGAAGACTACGACCGGATCTACCTGGATACCCCGCCGGCACTGAATTT
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Amino Acid Sequence |
>LysR family transcripitonal regulator
MELRHLRYFIAVAEELHFGRAAERLGISQPPLSQQIQALEEEIGARLFERTNRRVELTDAGRLFLDESRQVLAQVDKAVLLARRAHLGELGELKIGFTSS APFTSTIPSSIHAFRKAYPDVHLDLQEMSSRQVLKALLEESLQVGVIRPLALPDAVHWVELFREPLVAVLRADHPLAAGSEDGLAIAALAEEPFVFFPRS YGTGLYDQVIALTRQAGFSPRIAQEASEAMTIIGLVSAGLGVSILPASFRRTRVDGVVYRTLSDPEATTAVWLVRRQNEGSPLALSFIDLVTREAASLRR R
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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