Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCCTGCCTATGCTCCAGCCGCCAGACCGAACGGCGGGCGATAGTCGGACAGGCCCTTTGATCATGACCGCCACGGTCGCGATACGGAATCGCGCTCAGCC GCTACTTCCGCCCCACTGTTTCCGCCGCTTCCGCAGCCGAGCCCATTATCACCGGAGTTTTTTCCTACAGCAGTCCTCCCAGTCCCCTACGAAAACCAAG AAGTTCTACCGGCCAACGCCAGAAAACTACGATTGTCGCCGTTTCAGCCTCGCCCCAGGCTATCGCCCACTCGATTCTCCGCCTTGAAACCGATCGTTCT GCACATGCCTGCGGATATCGGCTTCTTTTCCCTGCAAGAACCGCGCTCCGGGCCGATTGACCATGCATCCAGCTTTTCCGCGTAACCAGGCTAGCCTTTC TTTCCCGCCGCCCTCCCCAAAGCCTTCCGGCAGTTCCACTTCGATCGTTCCATCCCTCAGGGCCGGACCGCTGCTCCGTACGGGCCTCATGGGAATGGCC
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DNA Sequence for Gene |
>Q010_04024
ATGCTGTCGTCCTGCCTTGCCAGTGCCGCCCCGGATGCGGGGCAGGCGCTGCGTGACGTGGAAAGCCGACGCCTGAACCTGCCCGCGCCGGTGGAACTGG ACGCCGAGCGCCCCAGCCCAGAGGACGGCGTATCACGGGCTGCCGAAGAGGGCGGCCCGACGGTGCTGGTCAAGCGCTTCCAACTCAGCGGCAACAGGCA GTTCGACGATCGACGCCTGCTGGCGCTCCTGCACGACCTGCCGGGCCAGGAACTCAATCTGAGCCAATTGCACGCCGCCGCCGCCCGCATCGGCGATTTC TATCGGGAAAAGGGATATGTGCTGGCGCGCGCCTTCCTCCCGGCACAGGAAATCCAGGATGGAACGGTACGCATCGAAGTGCTCGAGGGACGCTACGGCA GGATCGAACTGCACAACACGTCCCGAACGCTGGACCGCGTTCTACTCCGCCCCTTGAGCGCACTCGAACGAGATACCGCGGTCCAGGGCTCGGAGCTGGA ACGTGCGCTTCTGCTCCTGAGCGACATTCCCGGCCTCCAGGCCAAAGGCACCCTGCTGCCGGGCCAGGCGCAGGGAACCACGGACTTGCGCGTCGAGGCC CGCCCCGGCCCGCTGGTCGGCGGCAGGCTGGAGGCAGACAACTATGGCGGCCGCTACATGGGGGAATATCGCCTGGGAACCACCCTCGACTTCAACAGCC CGCTGCGACTGGGCGACCAGGCGAGACTGAGCCTGCTGGGCAGCGATCGGCACCAACGCTACTACCGTGCAGCCTATCAACTGCCCCTTGGTTCCCGAGG CACGCGCATCGGACTGGCCCACGCCGAGACGACCTATCGACTGGTACGCGACTTCTCGCGCCTGGACGCCCATGGCCGGGCCATTACCGACAGTCTGTTC GTCAGCCAGCCCCTGCTGCGTAGCCGCAGCTTAAGCCTGTCCACCCAGTTGCAATATGAAAACAAGCGACTTCGCGATGACCAGGAGCGTACCGGGAGGC ATAGCCGCAAGGAGATCCGCCTGTGGACCGCCAGCATCAGCGGAAACGCCCAGGACCGCTTGTTCGGCGGTGGACAGAGCGGCTTCTCGCTGGCCTATGC CCACGGCCAGCTCGCCATCGACTCCGCCGAAGAGCGGCTGCTGGACCGCTACACCATCGGTACCGCCGGCAGCTTCGACAAGATCATGCTCAACGCCGTA CGCCTGCAGCACCTGGGCGACCGCCTGCAGTTGTTCGCCCAACTCAACGCCCAGTGGAGCGGCGGCAACCTCGACAGCGCGGAACAGTTCGACATGGGCG GCCCCTACGGCGTTCGGGCGTTCCCCCTGGGCAGCTACAAGGGCTACGGCGACGAAGGCTGGCAAGCCAGTGCGGAGCTGCGCTACAGCCTGGCTCCGGG CTGGCAGCTGAGTTCGTTCATCGACCAGGGCGCGGTGAAATTCCTCAAGCACCCCAACACCAAGGAAGGCAATCGCAACCGCATGGCCGCCGTCGGCAGC GGCGCAACCTGGTACGGAACGGATCACCAGGTCAGCCTGACCGCCGCCTGGCCCCTGAGCCAGGAAAACAACATCGAGCCCGAGCGCACTCCCCGGCTGT GGCTGCAAGCGACCCGCTACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAAGCTCCCGCCCGCCATGCCGGCGGGCCCCACTGAAAGGAAAAGCCATGAACAAGAGCTATACGCTGGTCTGGAACCAGGCCACAGGCTGTTGGAACG TCGCAAGCGAAGGTACCCGTCGGCGCAGCAAGAGCGGACGCGGCAAGGCGCTCGTAGTCGCCGGAGCGTCACTGCTCGGCCTGTTCTGCCAGGCCCCTGC CTTCGCCCTGCCCAGCGGCGCCACGGTCGTTTCAGGCGATGCCGGATTCCAGACATCCACCGATGGCCGGCATATGGTCGTCAACCAGCAGAGCCACAAG CTGATCACCAATTGGAACGAGTTCAGCGTCCGTGCCGATGAGCGGGTCAGCTTCCACCAGCCGGGCCAGGACGCCGTCGCCCTGAATCGGGTGATCGGCC GCAACGGCAGCGATATCCAAGGGCGGATAGATGCCAACGGCAAGGTCTTCCTGGTCAATCCCAACGGCGTGGTCTTCGGCAAGTCCGCCCAGGTAAACGT
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Amino Acid Sequence |
>hemolysin activation/secretion protein
MLSSCLASAAPDAGQALRDVESRRLNLPAPVELDAERPSPEDGVSRAAEEGGPTVLVKRFQLSGNRQFDDRRLLALLHDLPGQELNLSQLHAAAARIGDF YREKGYVLARAFLPAQEIQDGTVRIEVLEGRYGRIELHNTSRTLDRVLLRPLSALERDTAVQGSELERALLLLSDIPGLQAKGTLLPGQAQGTTDLRVEA RPGPLVGGRLEADNYGGRYMGEYRLGTTLDFNSPLRLGDQARLSLLGSDRHQRYYRAAYQLPLGSRGTRIGLAHAETTYRLVRDFSRLDAHGRAITDSLF VSQPLLRSRSLSLSTQLQYENKRLRDDQERTGRHSRKEIRLWTASISGNAQDRLFGGGQSGFSLAYAHGQLAIDSAEERLLDRYTIGTAGSFDKIMLNAV RLQHLGDRLQLFAQLNAQWSGGNLDSAEQFDMGGPYGVRAFPLGSYKGYGDEGWQASAELRYSLAPGWQLSSFIDQGAVKFLKHPNTKEGNRNRMAAVGS GATWYGTDHQVSLTAAWPLSQENNIEPERTPRLWLQATRYF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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