Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCACGCAGGACGAAGATCACGTACTTGATGGAAACGACCCAGACCAGCGACCAGAAGATCAGCGACAGCACGCCAAGGACGCCATCGTGGTTGGCCTGCA CCCCGTAGCCGCCGATGAAGACCTCTTTCAGGGTATACAAGGGACTGGTGCCGATATCCCCATAGCAGACTCCAACCGCCCCGACCATCAGGCCGATGGC AGAGCTGGAATGCCCCTCCGACGTCTCCTCGGCACGCGTCGCTGCATCACTCATGAAACGCTTTCCCCCGGAAAAATTCGGCAAATGCTGCGCCCATGCC GTCCGCGATGCAAGCGCCGAGGCCACGGACTGCTATGACTATAGAAGGCCGGGGAGCCGATTGCCGAGCGCCCGCGGAGAGTTTTTCCAGGGCCGGAAAA GAGCTGCACGGGAGACTGGAAAAGCCGCGGCGCTGCCGCTAGAATTGCGCACTTTTTGATCAGAGGCGCCAGCAAGCGCGCCCGCCTACCGAGGTTAGCC
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DNA Sequence for Gene |
>Q010_03648
ATGTCCACCCCCACTCCCAAAGTCGGCTTCGTCAGTCTTGGATGCCCCAAGGCGCTGGTCGACTCCGAGCGCATCCTCACCCAGCTGCGCATGGAAGGCT ATGAGGTCGTCCCGACCTACGAAGACGCCGACGTCGTGGTGGTCAACACCTGCGGTTTCATCGACAGCGCCAAGGCCGAGTCCCTGGAAGTGATCGGCGA AGCCATCGCCGAGAACGGCAAGGTCATCGTCACCGGCTGCATGGGCGTGGAAGAACACGCGATCCGCGACGTGCACCCCAGCGTCCTGGCGGTCACCGGC CCACAACAGTACGAGCAGGTAGTCACCGCGGTGCACGAAGTGGTGCCGCCGAAGACCGAACACAACCCGCTGGTCGACCTGGTCCCGCCGCAAGGCGTCA AGCTGACCCCGCGCCACTACGCCTACCTGAAGATTTCCGAAGGCTGCAACCACAGTTGCAGCTTCTGCATCATCCCGTCCATGCGCGGCAAGCTGGTCAG CCGGCCGGTCGGCGACGTGCTGAGCGAGGCCGAGCGCCTGGTCAAGGCCGGGGTCAAGGAACTCCTGGTGATTTCCCAGGACACCAGCGCCTACGGCGTG GACCTGAAGTACAAGACCGACTTCTGGAACGGCCAGCCGGTCAAGACCCGCATGAAGGAACTCTGCGAGGCGCTGAGCAGCATGGGCGTATGGGTTCGCC TGCACTACGTCTACCCGTACCCCAACGTCGACGACGTGATCCCGCTGATGGCCGCCGGCAAGCTCCTGCCGTACCTCGACATCCCCTTCCAGCACGCCAG CCCGAAGGTGCTCAAGGCCATGAAGCGCCCGGCCTTCGAGGACAAGACCCTGGCCCGGATCAAGCAGTGGCGCGAGATCTGCCCGGAACTGACCATCCGC TCGACCTTCATCGTCGGCTTCCCGGGCGAAACCGAAGAAGACTTCCAGTACCTGCTCGACTGGCTGACGGAAGCCCAGCTCGACCGCGTCGGCTGCTTCC AGTACTCCCCCGTCGAAGGCGCTCCGGCCAACGAGCTGGGCCTGGAGCCGGTGCCGGACGAGGTCAAGCAGGACCGCTGGGAACGCTTCATGGCCCACCA GCAGGCGATCTCCGCCGCTCGCCTGCAGCTCAAGGTCGGCAAGGAAATCGAAGTGCTGATCGACGAAGTCGACGAACAGGGCGCGGTCGGCCGCTCCTGG GCCGACGCTCCGGAAATCGACGGCAACGTGTTCGTCGACAGCGACGAGCTGAAGCCGGGCGACAAGGTCCGCGTGCGCATCACCGATGCCGACGAGTACG ACCTCTGGGCCGAGCTGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCTCCCTGAAGAGCCCCGCCCCGCGGGGCTTTTTCATCGCCAACCGTTCCGGAGAGCACGATGCTCAACAACGACGTACTACGCAGCCTGCGCTACCT GCTGGATCTTCCCGATGCACATCTGGCCGAACTGGCCGCCCCGTTCGGCGAGCAAGTCGAAGCGGACCTGCTCGAGGCTTACCTGAAGAAGGAAGACGAA GACGGCTTCCAGGCCTGCCCCGACCGCTACCTGGCGCGCTGCCTGGACGGACTGATCATCCAGCGCCGCGGACGCGACGAGTCGCGTCCGCTACCGCCGC TGGAGCTGCCGTTGAGCAACAACATGATCCTGAAGAAGCTGCGGGTCGCCTTCGAACTCAAGGAGGAAGACCTCCATGCCATCCTCGCCAGCGTCGACTT CCCAGTCTCCAAACCCGAGCTGAGCGCCCTGTTTCGCAAGCCCGGTCACAGCAACTACCGGACCTGCGGCGACCAGTTGCTGCGCAACTTCCTCAAGGGC
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Amino Acid Sequence |
>ribosomal protein S12 methylthiotransferase
MSTPTPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAKAESLEVIGEAIAENGKVIVTGCMGVEEHAIRDVHPSVLAVTG PQQYEQVVTAVHEVVPPKTEHNPLVDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERLVKAGVKELLVISQDTSAYGV DLKYKTDFWNGQPVKTRMKELCEALSSMGVWVRLHYVYPYPNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKQWREICPELTIR STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANELGLEPVPDEVKQDRWERFMAHQQAISAARLQLKVGKEIEVLIDEVDEQGAVGRSW ADAPEIDGNVFVDSDELKPGDKVRVRITDADEYDLWAELV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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