Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGATGGCCTCGGCGGCGAGGACGACCTGGTCGCCCAGGCCCTGGTCGAAATGGGCCTGGCCGCGCCGGAGCGGGTGGCGGCGCTCTACGCGGAAGCC GGGCTGCTGCCGATGGGCACCCGCACCCGTGGCCGGGAGGCGTTGCGCGAACGCGTCGAACGGCACTTCCGGGTCGACTCCATCGTCTCCCGCCCGGCGG CCCTGCGCGTCGCCGACTCCGCCGAGTACCAGCGTTTCCACGCCGCCACCTTCGGCACCTATTTCGCACCGCTGGTGCCGGCGACGCGCCTGGAGGAATT CTTCGTCCGCCTCGGGCGGATCGCCGAGCGGCGCATGCAGGCCGACGGGCAGGTCAGCGAAATCCCGGTCAGCGTCTGGCGCTGCCGGGCGCGGGAGGGC GAGGCATAACCTTATGCGCAATCGGTCTGCCGCGCGGCTGAAAATCGCTACGGGCAATTGCACTCGGTGGCATCCGCAACCGATCAAGGATGAACCGACC
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DNA Sequence for Gene |
>Q010_02405
ATGCCCAACCCGCGTTCGCCGCGTCTTCGACTCGTCCCCGTGCTCTGCGCGGTCGGCCTGGCCTGCCTCGGCCAGCCCGGCGAGTCGACGGCAGAGGAGG TTCGCGCCACCAGCCGCGCCGAGATCCAGCGCTTCGACATCCCGGCCGGCGAACTGGCCCAGGTACTGCTGAGCATAGTCCGCCAGAGTCGCATCCCGAT CGCCTTCGACCAGCACCTGGTGGAGGGCCTGCCGGCACCGGCGATCCAGGGCTCCTACAGCGTCGAGCAGGCGTTGCAGCGGGCCTTGCGGGGCAGCGGC CTGGAATACAGCCGCAGCGCCGCCGGGGTGCTCAGCCTGCGGCGCGCCACGGCGCCGGATGCCGCGCTGCCGGCGGCGAAGCCCGCCGCGACCCTGGCCA CGGTGGTGGTCACCGGCACCCGCAAGGCCGATGTCAAGGCCGGCGAGAGCCTGGCACCGATCGATGTGGTCAGCGCCGAGCAATTGCGCGACAGTGGCAG CGGCGACCTGCGCGACGCCCTGGTGCGCCTGCTGCCCTCGCTGTCGCGCCAGGCCCAGGCCTACAACGCTTCGGCGCTGACCAACGCGCAGTCGCTGCGC GGCCTGAGTCCCAACCACGTGCTGGTGCTGGTGAACGGCAAGCGCCGCCACGAGACCGCCAACATCAATGTCAGCGGCGGGCTGCAGAGCGGCTCCACCG GGGTCGACCTGGACACCATCCCGCTCGCCGCCATCGAGCGCATCGAGGTGCTGCGCGACGGCGCCTCGGCGCAGTACGGCTCGGACGCCATCGCCGGGGT GATCAACGTCATCCTCAAGTCGGCCGACCACGGCGGCCGGCTCGCCTACGACAACGGTCGCTACGGCGATGGCGACGGTCTTACCCAGAATGGCGGGGTG AATGGCGGCCTGCGTTTCGGCGAGAGCGGTTTCCTCAACCTCAGCGCGCAGTTCCGCGAACAGGCGCGGACCATCCGCGCCGGCATCGACCAACGCACCG GGCACTACGGCAACCCGTCCATCGGCGACCCTTCGCTGCACCGCCAGGCGCTGGCCTACAACGCCGGCGTGGCGCTGGACGACAACGTCGAGCTGTACAG CTTCGCCACCTATACCCATCGCTCGGTGTCCTCGGCGCAGATCTACCAGTTGCCGTCCTTGGCGCCGCGGCTCTATCCGAACGGCTTCACCCCGCGCATC ACCAGCGACGAGGACGACTATTCGCTGACCCTCGGCGCCCGTGGCGGCGAGCTGTTCGGCGCCTGGGACTGGGACCTCAGCTCGACCTACGGTGCCGACC GCCCGGAGATCGGCATGGACCATTCGATCAACCTCGCCCTCTACGGCGAGACCGGCGATTCGCCGCGCTCCTTCGACCTGGCGCGCTACAAGGCCACCCA GTGGACCAACAATCTCGACCTGCGCCGCGACTTCGACCTCGCCTGGCTGCCGGCGCCGCTGAATTTCTCCTGGGGCCTGGAGCAGCGCCGCGAGCTCTAC GAGGTCGAGGCCGGCGATCCCTGGTCCTACTACAACGGCGGTTCCAAGGCACTCCCCGGGCAGGCGCCGGCCACCGCCGGACAGTGGAGCCGCGACGTGC TCGGCGCCTATCTCGACCTGTCCATCGCCCTCGACGAGCGCTGGCAACTGGAGACGGCGGCGCGCTACGAGCACTACAGCGACTTCGGCAGCACCACCAA CGGCAAGCTCGCCAGCCGCTACCGCTTCAGCCCCGAGGTATCGGCGCGGGCCAGTCTCAGCAGCGGCTTCCGCGCGCCGTCGCTGGCCCAGGAGAACTAC ACCAGCCTGGGCGTCTCGCCGACCATCGCCAGCGGCCTGCTGGCGGTCAACTCGCCGGCGGCCAGGCTGCTCGGCGCCGAAGACCTGGAGCCGGAAAAAT CGATCAGCTACAACCTCGGCCTGGTGCTCGATCCCTTGCCGGACCTGAACCTGGCCATCGACGCCTATCGCATCGAGATCCGCGACCGCATCGTCGACGG TGCCACCTATTCCGGACAGCCGGCGATCGATGCGCTGCGCGCCGGCGGGATCAGCATCCCGGCCGGACTGACCCAGGTCAGCACCCACTACATGACCAAC GGCGCCGACACCCGTACCCACGGCCTCGACCTCACCGCCAGCTACCTGACCCGGCTCGGCGAGTGGGGCCGGATCGACTGGCGCCTGGGCGCCAACGTCA ATCGCACGAAGCTGGTCAGGAATCATCGCGGGCGCAACGGCCAGCCGCTGCTCAACGACCAGCAGCAGGCCTGGATCACCAGCTCCACGCCGCGCAGCCA GGTCAGCCTGCAGGCCGACTGGAGCTACCGGCGCTGGGGCCTGACCCTGCGCGAAACGCGCTACAGCAAGACGGTTTCCGAACTGGACTACTACACCGGC GAGCATGCCTATTCGACCACGGTCTTCAACCGCTTCGAGAACTCGCCCAAGTACATCACCGACGTTGCCCTGCGCTATGCGGCGAGCCGCAACCTGACCC TGAGCGCCGGGGCCAACAATCTGTTCGACGTGAAGCCCGACAAGCTGCCGGCCGAGAGCGCCTACCTCGGCTTCAACCAGTACGACACCTATGCCTCGCA GATCAGCTTCAACGGCGCCTTCTACTACCTCGGCGCGGCCTACACCTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGGACGAACCATGAGCATCGAACTGCGCGGCGGCGTGCGCGCCTCCGCGGTCATCGGCGACAGCGCCTTCGCCCGCCAGGCTGCGCGTTTCCTGCCGG ACACCCGCAGTCGCGCGGTGAGTGCCTTCGACATCCAGCAGAAGGCCCGCCTGGAAGAGGCGGACGGCCTCGACAGCGCGCTGTTCACCGTTTCCGCTGC CTGGCCCGATCCCTGGTTGGTCGCCGGCTGGGCGCTGGCCGCGGCGCCGCGCCTGCGTGCCAGCGTCGCGCACCGACCGGGGAGCGCCCAGCCGACCGTT GCCGCGCGCGCCCTGGCCACTCTCGACGGGCTGTCCAACGGCCGTGCCGGCGTACACCTGGTGATCGGCTCCAGCGACGCCGACGTGCGCCGCGATGGCG ACTTCGCCGACAAGGACGAACGCTACCGGCGCGCCGTGGAGTACCTGGAGGTCTTCACCCGCGCCCTGGAAAGCCCCGAACCCTTCGATTACCACGGCGA
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Amino Acid Sequence |
>TonB-dependent receptor
MPNPRSPRLRLVPVLCAVGLACLGQPGESTAEEVRATSRAEIQRFDIPAGELAQVLLSIVRQSRIPIAFDQHLVEGLPAPAIQGSYSVEQALQRALRGSG LEYSRSAAGVLSLRRATAPDAALPAAKPAATLATVVVTGTRKADVKAGESLAPIDVVSAEQLRDSGSGDLRDALVRLLPSLSRQAQAYNASALTNAQSLR GLSPNHVLVLVNGKRRHETANINVSGGLQSGSTGVDLDTIPLAAIERIEVLRDGASAQYGSDAIAGVINVILKSADHGGRLAYDNGRYGDGDGLTQNGGV NGGLRFGESGFLNLSAQFREQARTIRAGIDQRTGHYGNPSIGDPSLHRQALAYNAGVALDDNVELYSFATYTHRSVSSAQIYQLPSLAPRLYPNGFTPRI TSDEDDYSLTLGARGGELFGAWDWDLSSTYGADRPEIGMDHSINLALYGETGDSPRSFDLARYKATQWTNNLDLRRDFDLAWLPAPLNFSWGLEQRRELY EVEAGDPWSYYNGGSKALPGQAPATAGQWSRDVLGAYLDLSIALDERWQLETAARYEHYSDFGSTTNGKLASRYRFSPEVSARASLSSGFRAPSLAQENY TSLGVSPTIASGLLAVNSPAARLLGAEDLEPEKSISYNLGLVLDPLPDLNLAIDAYRIEIRDRIVDGATYSGQPAIDALRAGGISIPAGLTQVSTHYMTN GADTRTHGLDLTASYLTRLGEWGRIDWRLGANVNRTKLVRNHRGRNGQPLLNDQQQAWITSSTPRSQVSLQADWSYRRWGLTLRETRYSKTVSELDYYTG EHAYSTTVFNRFENSPKYITDVALRYAASRNLTLSAGANNLFDVKPDKLPAESAYLGFNQYDTYASQISFNGAFYYLGAAYTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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