Pseudomonas aeruginosa 19660, Q010_02120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCAGCTCCAGGCTCCATACCGCGAACTGCTGCCGGTAGTCGCGGTGGTACTGCTCGCGATTGGCGAACCACTGGCTGGCCGGCAGTCCGGCCAGCTCCT TGAACAGCTCCGCATCCTTCACCGCGACGAAGTCCACGGCGATCGGCGAGTCGTCGTTGGCGCGCGCGGCGACATCCAGGGTCAGCCGCTGCAACTCGAC CCGCGGCGCGAAGAAATACGAGCAGCCGGCCAGCGCCAGGATCGCCAGCGCCAGGGAGAATTTCCGACATATGGTGAAACATCCGTGCTTCATGGGAGTC CAACGAAAATTTTATTTTGCAAATCCATAGACCTGTTCTAGCGTCTTTTGTAGTTCGTCGCCAGTGACGGACCAGAGGGATCGCCAAGGACAGGTTCTGC GCCGTTTTCCCTGTCATGCCTGTGATCCAGCAAGGGACTGCGATGATCAGGGCATCCCCCGATGCATTGCGCCCCCACCATTGCATCGGAGTCAGCCGCC
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| DNA Sequence for Gene |
>Q010_02120
ATGGCCGAGAGTACGCAGCACAAGCTGGACCGGGTGCGCCCGCCGCGCGTGCAGATCACCTACGACGTCGAGATCGGCAACGCCATCGAGAAGAAGGAGC TGCCCCTGGTGGTCGGCATCCTCGCCGACCTCTCCGGCAAGCCGGATACCCCGCCGGCGAAGCTGGTCGAACGGCGTTTCGTCGACATCGACCGCGACAA CTTCAACGAGATCCTCTCCTCCATCTCCCCCCGCGCCACCCTGCAGGTCGACAACACCATCAGCGGCGACGACAGCAAGCTGAACGTCGAGCTGCGCTTC AACCACATCGAGGACTTCGACCCGGTCAACCTGGTGAAGCAGGTGGTCCCGTTGCGTCGCCTGTTCGAAGCGCGCCAGCGCCTGCGCGACCTGCTGACCA AGCTCGACGGCAACGACGACCTCGACCAGCTGCTGCAGGACGTGGTGGCCAACACCGAAGGCCTGCAGGAAATCAAAGCGGCCCGCCCGGAAGCCGAAGC GGCCCCGGCCGGCGACAGCGAACCCCCGGCCGACCAGCCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTCTTCCCGGAGAAGCCGCCATGCCCAAGTCATCCGCCGCCGAACAATCCGGCGAGAGTTCGACCCAGACCCTGTCCCTGCTCGACGAGATCATTGCC AAGGGCCGCATGGCCCACGACGACAGCCAGCAGGACTACGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTCCTCGACGAGGGCATGGCCGTCGACA AGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGATGCGCTGATCAGCGACCAGCTCAACCAGATCATCCACCACCCCGAGTTGCAGAAGCT GGAAGCCTCCTGGCGTGGCCTGCACCAACTGGTGAGCAACACCGAGACCAGCGCGCGGCTCAAGCTGCGCCTGCTGAACGTCGGCAAGAACGAACTGCAG AACGATCTGGAGAAGGCGGTCGAGTTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAGGAATACGGCACCTTCGGCGGACACCCCTTCAGCCTGC
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| Amino Acid Sequence |
>type VI secretion protein
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPDTPPAKLVERRFVDIDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRF NHIEDFDPVNLVKQVVPLRRLFEARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIKAARPEAEAAPAGDSEPPADQPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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