Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAGATCTGATCTGTCTCGTACTCGAAAAGAACTCGCAGTATCTCAGTCTACCGCCCTGCGGTGAAGTCTGCTCGAGTCCCTGCCTGGTCTTTATGGGCT CGAGTGCTATTCGCATCTAGATGACTACACAATGCTTGGAAGGTCGGGTGGGATGGGTGTCCTGTTAGAGGGGTTGCTGAGTTACCATGTCTTACTGGTT TGGCTGGAGTCTGTAGATGGGGGCTTGGTTCATGGCATCGTGTCGCTCCCGGTTGGTCTTCGCCAAAGGTCAAGCTTTTATGGAACTACTTTCGTTTCTG ATGGTCAAGATGCATTGAGGCTTTTGGCGGAGAGTTTCATGTATTGCTTGCACGTAATTCATCCTGTTGAGTTCGCTGTCGGTAATGTGTCTTCTGGGCG CTCTGTCTTTCCCTTGCTAGTGTGTAAAAACTTCTAATTAAAAATTGGCTAATTATAATTGGTTTTCAATGGTTGGCCGGAAGAGTAGCTGGACTTTTCG
|
|
DNA Sequence for Gene |
>Q010_01157
ATGACTGACGAAATACAAAAGCACGGCGGTGTAGCTGGCGATATCGATCTGGTTGAGCTGGTTCGAGGATTATGGGAGGAGAAGTGGATAGTTCTTATAT TTTCTTTGCTAGGTATTTTGTTTGCAGCTATCTACGCTTTTCTCAGCACTCCTGTCTATGAGGCCCGCATAGCGATTTTGCCTCCGTCGTTGAGTGATGT GGCAGGTTTCAATCAGGGGCGTACCAGGGAAACCGGGCTTGGTCCCTTCAAGGTCCAGGATGTGTACTCTGTTTTTGTTCGCAACCTGCAGGCTGATGGA ACTCGTCATCGTTTTTTCAATGAGACCTATTTGCCTTCTTTGGATGAAGAGCTTCGTTCGGTTTCACGTGATGCGCTCTATAAAAGGTTCACTGATCAGA TAAGTATTAGTTTGCCGGGGAAAGACTTTCCGGGTCGTTATCTTGTTGCGATTGAACAGGAGGATCCGGAGCGTGCGGCGAGTTGGGTTCGTCGGTATAT AGCTGATGCGGCCGAGATTTCTATTCAGGAAATGTTGAACAATGCGCATCGCGAGATTGAGGTCAAGGCTCGAGATATTGAGCAGCGCATACAGAACTTG CGAGAGAATGCCAAGGCAAGACGTGAAGATCGTATTGTTCAGCTCAAGGAGGCGTTGAAGGTCGCAGGTGCGCTGAAATTGGAGGAGCCTCCACTGATCA GTGGGCAATCCTCTGAGGAACTCTCGGCTATCATGAATGGAAGTCTGATGTATATGCGTGGCAGTAAGGCGATTATGGCCGAGATTCAGACTTTGGAGGC GCGTAGCTCTGATGATCCTTTTATTCCGGCGTTGCGTACTCTTCAGGAACAGCAGTTATTGCTGAGTAGCTTGCGTGTTAATTCGGAGCGGGTTTCTGTT TTTCGACAAGACGGTCCGATAGAAACGCCGGACTCACCAGTTCGTCCAAGGAGAGCGATGATTTTGATTTTTGGGTTGATAATTGGTGGTGTGCTTGGTG GTTTTCTGGCGTTGTGCCGGATTTTTTTGAAGAAGTATGCTCGTTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GAAAGAGCTAGTTATTGAAGTGGTGACGCGTTGCACGTACTTTGGTCGAGTAATTTTGTGGAGTAGGTTTTCGTTGGGTGGCTCGATTGCTAAGGGGTGA GAACGTTTCCATGCGGTGTTTCCTCAGCTCTGTCTCCTGTGCCTTGGCTCCTTGAGCGCAGAGGTTAACAGTTGAGCTGTGGCTGTGGGTATGTGACGTC TGTTGCGGTGGTGTCTGGTTCCTGGTGTCGGGTGTGCGAGAAGATGCCAAGTTGCCTGGCAGGTCGTTGCGTGTCGTAGCCGTATTCGAAGCTCGGCAAT CGCGGGGTGATTTACAGGACTGTGCTTAATACGGCGCAGGCTTGGTCAGGGCCGAGTCGGGTCTTCGGGTGTCAACTGGATCGTGCGAAAACCGGTTTCG TGGATGCTGATAAGCTCGGCTTGACTGGCAGTCCAGGGCGGTTACCAGGTCTGTGGAGGCGCAAAATGTATAGGAGCCTGCGTGAGCTGGGCAGGCTGAA
|
|
Amino Acid Sequence |
>chain-length determining protein
MTDEIQKHGGVAGDIDLVELVRGLWEEKWIVLIFSLLGILFAAIYAFLSTPVYEARIAILPPSLSDVAGFNQGRTRETGLGPFKVQDVYSVFVRNLQADG TRHRFFNETYLPSLDEELRSVSRDALYKRFTDQISISLPGKDFPGRYLVAIEQEDPERAASWVRRYIADAAEISIQEMLNNAHREIEVKARDIEQRIQNL RENAKARREDRIVQLKEALKVAGALKLEEPPLISGQSSEELSAIMNGSLMYMRGSKAIMAEIQTLEARSSDDPFIPALRTLQEQQLLLSSLRVNSERVSV FRQDGPIETPDSPVRPRRAMILIFGLIIGGVLGGFLALCRIFLKKYAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|