Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTTCATCCAGGTCGCGGTGCTGTTGCTGCTGACGATCTTCGTGCTGTTCCGCCTGCTCGGCCGCAACTACGACGCCGCGGTGCTCTGCGCCGGCTTCCT CGGCCACGGCCTGGGCGCCACGCCCAACGCGGTGGCCAACATGGGCGCGGTCTGCGAGCACTATCGGGTGTTCTCGCACAAGGCCTTCATCATCGTGCCC CTGTGCGGCGCGGTACTGATCGATCTCGTCGCCATCCCGGCGATCACCTGGTTCATCAACGCCTTCAGTTGAACCATGGCGGCGCTCCGCTAGCGGAGCG CCAGCTTTCCGACGAGCGCCTCGGCCACTCGCCAGCAAAACGCCATTATCCCGTCGAAATCTCTCCGAAATTCCTACAGAATGTGGAAACCATTCCTAGG AAAACCTGTCTGTGCCTCTGATTTCTCCGTTCTTCAGTTGGCTGGCACGAAACTCGCCTTAGCCCTACTGTCGCCGTCTTTCGCGCCAGAGGTTCCGCGC
|
|
DNA Sequence for Gene |
>Q010_01140
ATGGCTCCTCCCAAGCAGTCCAATACCATCGATTTCGACGCCGCCAAGCAGAAGCGCGGCCCCCAGCCCGGCGGCAACGCCAGCGGGCCGCGCGCCAGCA ACCTGACGGAGCTGCGCCAGCAACTGACCCTACAGTTGCAGAGCAGCCTGGAGGCGGAGCGGATTCTCGGCCTGTTCTTCGAGGAAGTCCGCCAACTGAT CCCGCTGGACGCCCTTGGCTACCGCCATCCGGGCTCCGACCTGCGCCTGGAGTTCGGCAGCAGCGCCAAGCATTCGGTGAGCTATCGCCTGAGCCATGAC AGCGACTACCTCGGCGAACTGATCTTCCGTCGCCGCCAGCGCCTCGGCGAAGACGAACAACGGCAACTGGAGAGCCTGCTCGGCACCCTGCTGTTCCCGC TGCGCAACGCCCTGCTCTATCGCGCCGCGATCCAGACCGCCCTGCGCGACGCCCTGACCGGCACCGGCAACCGCATCGCCATGGACCAGGCGCTCGGCCG CGAACTGGAACTGGCCCGGCGCAACCTGCAACCGCTCTCGGTGCTGATGCTCGATATCGACCACTTCAAGCGGGTCAACGACCACTACGGTCACACCGTC GGCGACGAAGCCCTCAAGGCCGTGGCGGAAACCATCAAGGACCACCTGCGCAATGTCGACATGGTGTTCCGTTTCGGCGGCGAGGAATTCCTCGTCCTGC TGTCCAGCACGCCGCTGCAGGCTGCCTGCATGGTCGGCGAACGCCTGCGCCAGGCGGTGGAGGAGTTGGACTACCGGCACGCCGGCGAACCGCTGAAGCT GTCGATCAGCCTCGGTTGCGCCGACCTGCGGCCCGGCGAAGGCAGCGACGACCTGCTGCGACGGGTCGACGAGGCGCTCTACGAAGCCAAGCGCGACGGC CGCAACCGCCTGCGCTGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCCCGCCGCCTCGCCCTCGAAGCGCGGAGCAGGGGCATCGGGCGACGGCAGTAGCAACGGCTCTCACCGGCGCAGTCACGGTTTCCGCCAAGGTCCTGC CGCTTATGGCTGCGCCGGCTCGTCCGGGGCGCCATAGGCCTGGCGCAAGCGGACGCGCTTCTCCAGCAGCCAGCCGCTGGTTTCCTTGCCGTCTCGAGCC ACGTACATGACGTTCAGCCACTCGCCGCTCGGCTTGTAGACAGTGACGAAGTCGCCGGGAATCACGAAGACCCCGGTGACACAGTCGGCACGCGGCGCGC TGTGGAAATAGGCGCGCCCCTTGTCGATCACCTCGCCCTCCAGCGGCGGACGGAAGTTGTCCTCGGGGCCGGCCGTCGCCTCGCCAAGGCTTGCACAGCT CTGCGCCGGCATCGCCGCATCCTCGGCCAGCCCGGCGACGCTCCATAGCGCACAGAGCGCGATAGCCAGGATCCTGTGCATTTCACCACCTCCTTGTGTG
|
|
Amino Acid Sequence |
>DeoR family transcriptional regulator
MAPPKQSNTIDFDAAKQKRGPQPGGNASGPRASNLTELRQQLTLQLQSSLEAERILGLFFEEVRQLIPLDALGYRHPGSDLRLEFGSSAKHSVSYRLSHD SDYLGELIFRRRQRLGEDEQRQLESLLGTLLFPLRNALLYRAAIQTALRDALTGTGNRIAMDQALGRELELARRNLQPLSVLMLDIDHFKRVNDHYGHTV GDEALKAVAETIKDHLRNVDMVFRFGGEEFLVLLSSTPLQAACMVGERLRQAVEELDYRHAGEPLKLSISLGCADLRPGEGSDDLLRRVDEALYEAKRDG RNRLRCA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|