Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTTCTGGGTCAACCTGCTGGAGGTGCCGGGGCGGGAGGACGGCAGCGGCAACCTGCTGCTGGTGAGCTACCGCCTGCGGATGAAGCTCCTGTTCCGTCC GCAGGGTCTGGCCGGCGATCCGCGAGCCGCCGCGCGCCAGGTCGTCTGGCGCCTGCGTCCGGCGGCACGGCCGGGGCAGCGGGCGCTGCTGGAGGCGGAC AACCGCAGTCCCTATCACGTTTCCCTGGTGCGCCTGGAACTGGGCGAGGGCGACCTCGCCATGTCCCTCGGCAGCGTCACCTTGCCGCCTTTCGCCCTTA CCCCGTTGAGTCTGCCGGCCGTGCCCGGCGAGGCGGCGCAGGTCCATTTCGATGCGGTGGGGGATGACGGCCAGATCGAGCGCGGCGACGCGCCGGCAGA GAGATACCCGTAGGAGTTCGGCAGGGCCCGGGGAGTTGGGCTCCTGCCGTAGCACGGCCCTGCGAATAGGTCGCGGGGTTTCACTGGAGGAAGGAAGCAC
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DNA Sequence for Gene |
>Q010_00141
ATGAACAAATGCTATGCACTGGTCTGGAACGTATCCCAGGGCTGCTGGAACGTCGTCAGCGAAGGCAGTCGCAGGCGCGGCAAGCCCGCCGGCGCCAAGG CGGCGATCGCCTCCGCCCTGGCCCTGCTGGGCGCCACGGCCCTGGCTCCGGCCTATGCGCTGCCAACCGGGGGAACGGTGGTCGGCGGGAGCGCGAACGG GGAGATACACCTGTCGGGCGGCAACAGCCTGTCGGTCAACCAGAAGGTCGACAAGCTGATCGCCAACTGGGACTCCTTCAGCGTTGCCGCCGGCGAGCGG GTGATCTTCAACCAGCCGAGCAGTAGCTCGATCGCCCTGAATCGGGTGATCGGCACCAAGGCCAGCGATATCCAGGGCCGGATCGATGCCAACGGCCAGG TCTTCCTGGTCAACCCCAACGGCGTGCTCTTCGGTCGCGGCGCCCAGGTCAACGTCGGCGGCCTGGTGGCTTCCACGCTGGACATCACGGATGCCGAGTT CAACGGCAACTCCTCCAGATACCGTTTCACGGGTCCCTCTACCAACGGTGTGCTCAACCACGGGGGCGCCATCACCGCGGCGGAAGGCGGCAGCATCGCC CTGCTGGGCGCGCAGGTCGACAACCGCGGGACGGTCCTGGCGCAGATGGGCGGTGTCGGGCTCGGTGCGGGCAGCGACCTGACGCTGAATTTCGACGGCA ACAAGCTGCTCGACATCCGCGTCGACGCCGGGGTCGCCAATGCGCTGGCAAGCAACGGCGGCCTGCTCAAGGCCGACGGGGGGCGAGTCCTGATGGCGGC CAGGACCGCCAATGCGCTGCTCAACACGGTGGTTAACACCCAGGGTGCCATCGAGGCCCGCTCGCTGCGCGGCAAGAACGGGCGGATCGTGCTCGATGGC GGCCCGGACGGCAAGGTCATGGTGGGAGGCGCCTTGTCCGCCAATGCGCTGAACGGACCGGGGCACGGCGGGACGGTCGAGGTCCGGGGGCAGGCGGTGG AGGTGGCCCTGGGCACCCAGGTGAACACGCTCGCCAGCAATGGCCTCAATGGCACCTGGAAGATTGCCGCCGACAAGATCGACGTGCGCCCGTCGGCGGT GTCGGATGGCGTCACCGTTCATGCCGACACCCTGTCGCGGAACCTGGCGAGCACCAATATCGAACTGGTTTCGACCAAGGGCGACCTGGACCTCGACGGC GCGGTGAGCTGGGCATCGGGCAACCGGCTGGGGCTGGGCTCCGCGGCCGACCTGACGCTGAATGGCAGGCTGAATGCCAGCGGCGCCAAGGCTGGGCTGG AGCTGAAGGCCGAAGGCGCTATCGATATCAATGACAAGATCGTTCTCGGCGGGGCTGGCAGTGCGCTGGCCATGGATGCCGGCGAAGGCCACCGGGTGAA CGGTACGGCGTCGGTCTCCCTGGCCGGGGCCAACGCGACCTACGTCTCCGGCGGCTATTACTACACGGTGGTGCAGAACCTGGCGCAGTTGCAGGCGATC AACAAGAACCTGGACGGCCTGTACGTGCTCGGCGGCAATATCCTGGGCGGCAGCTATTACTGCACGGCGCTGCAGTCCATCGGCGGGCCCGCCGGTGTCT TCAGCGGCACGCTGGACGGTCTCGGCAACAGCATCGGCAATCTCTCGATCAGCAACACCGGGCCGAATGTCGGGCTGTTCGCCCACTCCTCGGGCACCCT GAGCAACCTGAAGCTGAACAACCTGCGGGTATCCGATAACACCTACGGCTCCGGGCCGTCTTCGCTCGGCGCCCTGGTCGGGATCAACAGTGGCCGTATC GCCAACGTCAGCGCCAGCCGGGTCTCGGTCGTCGGCAGCCGACTACGCTCCAACGCACTGGGCGGCCTGGTCGGGCGCAATATCAACGGGCAGATCACGA ACGCATCCGTCAGCGGCGGCGTCAGCGCTTATGCGGCGAGCACGGCGGTCGGCGGTCTGGTGGGGGAGAACTTCACCACCGCCTGGGGGCCGGAGGCGAT CATCGAGAACGCCCACAGCAACGTCCATGTGGCTGCCCAGACTACCGAGCGCAACAGCCTGGGCGGCGTCGGCGGCCTGGTCGGACTGAATGCGAAGGGC ATTATCAGGGCGTCCGGCAGCCAGGGGAAGGTCGAGACCTACCGGCCCGGCCTGAACGTCGGCGGCCTGGTCGGCTACAACATGTTCGGCCACGTCTCCG ACAGTAATGCCAGCGGCCTGGTGAGGACCGGGGGGGCGGGGAATACCGGCGGGCTGGTCGGCCTGAGTTCCGGCGGCGAGATATTCCGCTCGCAGGCGAG CGGGTCGGTGTACAGCAATGGCGGCCTGGCGACTGGAGGGTTGATCGGCAAGGCAGAAGGCAACGGCATGCTCGGAAACCTGAAAGCCAGCGGCAGCGTC ACGGACCAGGGGGGCGCGGATCTGGGCGGGCTGGTCGGCAACAACAGCCAGAGCGCCATCGAGACCGCCGAGGCGACGGGCAAGGTCAGCGGCGGCAGCA ACAGTCGCGTCGGCGGGCTGATTGGACACAACCTCGGCGGCTCCGTCGCCCATGCGATCTCGCGCGGCGACGTGAGCGGCGGCTTCAACAGCCTGGTGGG CGGGCTCGTCGGCCACAACGGCGGCGAACTGGTCAACGTGGATGCCAGCGGCAGGGTCAGCGCCGCTGCGAGTGCGTCGGTTGGCGGCCTGGTCGGCAGC AACGCCGGTTCGATCCTGTCGGCGCGCAGCAGCAGTACTGTCAGTGGCGGCGGGCGCAGCCGCATCGGCGGCCTGGTCGGCGAGAACCAGATCCAGGGAC GCATCGTTTCGTCCATGTCGGAAGGCACCGTCAGCGGCGACTACTACGTCTCCATGGGCGGGCTGGCCGGCGTCAACCTGGGATCGATCGAGTACTCCGG CGTCAGCGGCAAGATCGACTTCAAGCCTCAGTCCCATTACGGCCAGATCTACGGCGCGCAGGTCGGCGAGAACCGTGGGGTCCTGGGCGGCAACTACGTG ATCGGCGAGGCGGCGCTCCTGCCGCCTGCCGGTATCGACTACGGCAACATCTGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCGGCAGGGGAGGTCCCAGGCGGACCTCCCTTCCCGGCCGGGGCCGCTCTCGCCTGGAGTGTGGCCCTCTTCCGCAGGCGCAATCTTGGAGAGTTCCA TGAGCATGAGGTTATTTCCTGGCCGCGTTTCCCTGCGCCGTCGGCCTGGCGCGCAGGCTCGGCAGGCGCTCTTTCTCGGCCTCTGCTGCCTGACCGGCGG CCAGGCCTGGGCCCTGAACGAGGCCGCCCTGAACTGCTCGTTCGGCAATGGCAAAGGCTTGCCCTGGCGTGTGGTGAACGAGCTGACCAGCGGCACGGCG AAAGGCACGGTGCTGTTCGCCAGGCCGGTGAGCCTGTTCCTGAACTACAAGCCCCAGGCTTCCCAGGAGGCGCATGAGCTGATCCTCGGGGGGAACTGGT CCGGGGTGGGCTATCCGGGGCCCTACGGCACGGTGGCGTCCGACGTCAAAGGCATCGGCTATCGGATCTCGGTGGATGCCCAGGACGGCGTCAAGCGGGT
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Amino Acid Sequence |
>adhesive protein CupB5
MNKCYALVWNVSQGCWNVVSEGSRRRGKPAGAKAAIASALALLGATALAPAYALPTGGTVVGGSANGEIHLSGGNSLSVNQKVDKLIANWDSFSVAAGER VIFNQPSSSSIALNRVIGTKASDIQGRIDANGQVFLVNPNGVLFGRGAQVNVGGLVASTLDITDAEFNGNSSRYRFTGPSTNGVLNHGGAITAAEGGSIA LLGAQVDNRGTVLAQMGGVGLGAGSDLTLNFDGNKLLDIRVDAGVANALASNGGLLKADGGRVLMAARTANALLNTVVNTQGAIEARSLRGKNGRIVLDG GPDGKVMVGGALSANALNGPGHGGTVEVRGQAVEVALGTQVNTLASNGLNGTWKIAADKIDVRPSAVSDGVTVHADTLSRNLASTNIELVSTKGDLDLDG AVSWASGNRLGLGSAADLTLNGRLNASGAKAGLELKAEGAIDINDKIVLGGAGSALAMDAGEGHRVNGTASVSLAGANATYVSGGYYYTVVQNLAQLQAI NKNLDGLYVLGGNILGGSYYCTALQSIGGPAGVFSGTLDGLGNSIGNLSISNTGPNVGLFAHSSGTLSNLKLNNLRVSDNTYGSGPSSLGALVGINSGRI ANVSASRVSVVGSRLRSNALGGLVGRNINGQITNASVSGGVSAYAASTAVGGLVGENFTTAWGPEAIIENAHSNVHVAAQTTERNSLGGVGGLVGLNAKG IIRASGSQGKVETYRPGLNVGGLVGYNMFGHVSDSNASGLVRTGGAGNTGGLVGLSSGGEIFRSQASGSVYSNGGLATGGLIGKAEGNGMLGNLKASGSV TDQGGADLGGLVGNNSQSAIETAEATGKVSGGSNSRVGGLIGHNLGGSVAHAISRGDVSGGFNSLVGGLVGHNGGELVNVDASGRVSAAASASVGGLVGS NAGSILSARSSSTVSGGGRSRIGGLVGENQIQGRIVSSMSEGTVSGDYYVSMGGLAGVNLGSIEYSGVSGKIDFKPQSHYGQIYGAQVGENRGVLGGNYV IGEAALLPPAGIDYGNIW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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