Strain | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGAAGTCCTCCAGCCGCGGCAGCAGCCAACCGACCGTGAAGGTTCCGACCGCGCCGACGGTGAGCACGTCCCGGTAGTGGCCACCCTCGAAACGTTC CAGCAGGCCGGCGATGCGGTCGAAGGAGTCACACAGCACCGGCAGCAGGCTCTCGCCCTCGTGGGTCAGCATCAGGCCGCGCGGCAGACGCTTGAACAGG GCCACGCCAAGACGCTCCTCGAGGCTCTTCACCTGGTGGCTGACCGCCGCCTGGGTCACGCACAGCTCGATGGCCGCGCGGGTGAAGCTCAGGTGCCGGG CCGAGGCTTCGAAGGCGCGCAGGGCGTTCAGCGGCAAATGGGGTCGAACCAATCTCTGCTCCAAATTTTTCTAATGGCTGCCGCGAGTATTCGTCGTTTG CCGCAAATCCTGCGCAAGCCTAGATTTTCCCCGCCCGCCGATCAAGGAGCGCTCCCGGGGCGGTTTCTCATGCAGCCAACGACAAAGGACGCCAATCCTC
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DNA Sequence for Gene |
>Q010_00111
ATGCGCGATACCAGATTCCCCTGCCTGTGCGGCATCGCCGCTTCCACACTGCTGCTCGCCACCACCCCGGCCATTGCCGGCGAGGCCCCGGCGGATCGCC TGAAGGCACTGGTCGACGCCGCCGTACAACCGGTGATGAAGGCCAATGACATTCCGGGCCTGGCCGTAGCCATCAGCCTGAAAGGAGAACCGCATTACTT CAGCTATGGGCTGGCCTCGAAAGAGGACGGCCGCCAGGTGACGCCGGAGACCCTGTTCGAGATCGGCTCGGTGAGCAAGACCTTCACCGCCACCCTCGCC GGCTATGCCCTGGCCCAGGACAAGATGCGCCTCGACGACCGCGCCAGCCAGCACTGGCCGGCACTGCAGGGCAGCCGCTTCGACGGCATCAGCCTGCTCG ACCTCGCGACCTATACCGCCGGCGGCTTGCCGCTGCAGTTCCCCGACTCGGTGCAGAAGGACCAGGCACAGATCCGCGACTACTACCGCCAGTGGCAGCC GACCTACGCGCCGGGCAGCCAGCGCCTCTATTCCAACCCGAGCATCGGCCTGTTCGGCTATCTCGCCGCGCGCAGCCTGGGCCAGCCGTTCGAACGGCTC ATGGAGCAGCAACTGTTCCCGGCACTGGGCCTCGAACAGACCCACCTCGACGTGCCCGAGGCGGCGCTGGCGCAGTACGCCCAGGGCTACGGCAAGGACG ACCGCCCGCTACGGGTCGGTCCCGGCCCGCTGGATGCCGAAGGCTACGGGGTGAAGACCAGCGCGGCCGACCTGCTGCGCTTCGTCGATGCCAACCTGCA TCCGGAGCGCCTGGACAGGCCCTGGGCGCAGGCGCTCGATGCCACCCATCGCGGTTACTACAAGGTCGGCGACATGACCCAGGGCCTGGGCTGGGAAGCC TACGACTGGCCGATCTCCCTGAAGCGCCTGCAGGCCGGCAACTCGACGCCGATGGCGCTGCAACCGCACAGGATCGCCAGGCTGCCCGCGCCACAGGCGC TGGAGGGCCAGCGCCTGCTGAACAAGACCGGCTCCACCAACGGCTTCGGCGCCTACGTGGCGTTCATTCCGGGCCGCGACCTGGGCCTGGTGATCCTGGC CAACCGCAACTACCCCAATGCCGAGCGGGTGAAGATCGCCTACGCCATCCTCAGCGGCCTGGAGCAGCAGGCCAAGGTGCCGCTGAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCGCGCTCGCGAGGGCGACGGAGCGTAGCGGCGCGGGACGCCGGTCCTGGCTATGATGGTGCCATGAGCGCTTCCCCGCCCCTCCGCCAGCCCTGCCCG CCCGGCGCCTGCGTCTGCGAACGCGAGCGCCTGGAGGCGCCCGGCGCGGACCGTCGCATCCTCCTCCTGACCCGCCAGGAAGAGCAGCGCCTGGCCGCTC GCCTGGAAGCCCTGCGCAGCCTGGAAGACCTGGAACACCTGCTGCGGCGCATGGAGGAACAACTGGGCATCCGCCTGCGGATCGCCCCGGCCTTCGGCGA GGTGCGCAGCATGCGCGGCATCCGCATGCGCTTCGAGGAGCAGCCGGGGCTCTGCCGCAAGACCCGCCAGGCGATTCCCGCCGCCATCCGCCGCGGCCTG GAGAAGCGCCCGGAAGTCGCCTACGCCCTGCTCAACGCCCACGACCTGCTGCGCGACGCCTGAAGGCACTGAACGACAGGAAGAGGATGTCGCTCAAGAC
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Amino Acid Sequence |
>beta-lactamase
MRDTRFPCLCGIAASTLLLATTPAIAGEAPADRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYFSYGLASKEDGRQVTPETLFEIGSVSKTFTATLA GYALAQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERL MEQQLFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRVGPGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWAQALDATHRGYYKVGDMTQGLGWEA YDWPISLKRLQAGNSTPMALQPHRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFIPGRDLGLVILANRNYPNAERVKIAYAILSGLEQQAKVPLKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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