Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGAAGCGGCACACGGTGAACTCCGAGTTCGACATCAAGCAGATCTCCGCGCTGGCTCCGGTGGAAATCGCCTACAGCTACGGCAACGTCAGCGACACCG CCTACAAGGCCCTGGCCCAGGCCGGCGCCAAGGCGATCATCCATGCCGGCACCGGCAACGGCTCGGTGCCCGCGCGCGTGGTGCCGACCCTGCAGGAACT GCGCAAGCAGGGCGTGCAGATCATCCGCTCCTCGCACGTCAATGCCGGCGGCTTCGTCCTGCGCAACGCCGAGCAGCCGGACGACAAGAACGACTGGATC GTCGCCCACGACCTGAACCCGCAGAAGGCGCGCATCCTGGCCGCGGTCGCGATGACCAAGACCCAGGACAGCAAGGAGCTGCAACGGATCTTCTGGGAAT ACTGAGTGAACCCTTCCGGCGCCGCCTGCCGGCCGTGCCGGAAAACCGCCCGCTCCGCCGCCCATCGTGGCGGCGGGCTGGCCTAGCCGCGACGACTGTG
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DNA Sequence for Gene |
>Q011_03298
ATGGAATCCCCCGACCCGCCCTGCAGCGTACCTCCGTCACTGACCGTGAAGCCCCGCCTCGTCCGCCAGTTGCTGCTCCCCATTCCCCTGCTCCTGCTGA TGCTCGGCTTCGGCTACGGCGGCTACCGGGTCAGCGAGAGCGCCGGCATCCGTGCCCTCGCCGAGAATGGCGAACGCCAGCTGGAGCTGCATGCGCGGAC GGTCGAGAGCGAGATCAGCAAGTACACCTACCTGCCCAGCCTGCTGGAGCTGGAGCGCAGCGTCAGCCACCTGCTCACCGACCCGACGCCATACCGGCGC AACCAGGTCAACGCCTACCTCGAAGGCCTCAACCGCCGCGCCGGCAGCCGCGCGGTGTACCTGCTGGACACCAACGGCCGGGTCCTGGCCACCAGCAACT GGAGCGACCCGGACAGCTACCTCGGCGAGGACCTGTCGTTCCGCGCCTACTGGCAGGACGCGATGAAGGGCAAGCCGGGCCGCTTCTACGGCATCGGCAG CACCCGCGGCGAGCCGGGCTACTACCTGGCCCACGGCCTGGTCCACGGCGGCCGGATCATCGGCGTGGCGGTGGTCAAGGTGAAGATGGACGCCCTCGAG GAGCGCTGGGAGAAGGCGCGCCTGGAAGCCTTCGTCAGCGACGAGAACGGCATCATCATCCTCTCCAGCAACCCTGCCCTGCGCCTGAAGGCGGTGCGCT CCCTGAGCGCCGACGACAAGGAGCGCCTGGCGCGCAGCATGCAGTACTACTGGTGGGCGCTGAACGAGTGGCAGCCGCTGCTGCGCGAGCCGCTGGCCGC CGGAGTGGAGAAGCTCAGTTTCCCCGCTGATGAGCAGCACCCGCGCGGCGAAGCGGTCACCTACCTGGCGCAGACCCGCGCGCTGAATGACACGCCGTGG AACCTGACCCTGCTCAGCCCGCTGGAAGACCTGCGCCGCGACGCGGTGCGCAATGGCATGCTGGCCGCCATCGGTTTCGCCCTCCTGGCCTTCCTGCTGA TCGCCTGGAACGAGCGGCGCAAGGTACTCGCCACCCGCCTCGCCGCGCGCGAGGCGCTGCAACGGGCCAACGGCGAGCTGGAAGTGAAGATCGCCGAACG CACCGCCGACCTGCAGGCCAGCAACGCACGCCTGACTGCCGAGATCCACGAGCGCCAGCAGGCCGAGGACACCCTGCGCAAGGCCCAGGACGAACTGGTC CAGGCCGGCAAGCTGGCGGTGATCGGGCAGATGTCCACCAGCATCGCCCACGAACTCAACCAACCGCTGGCGGCACTGCGTACGCTGTCCGGCAACACCG TGCGCTTCCTCCAGCGCGGCAAGCTGGAGACCGCCAGCACCAACCTCGCCACCATCAATGAACTGGTCGACCGCATGGGCCGCATCACCGCCAGCCTGCG TGCCTTCGCCCGGCGCAGCGACGACGCCGGCCAGGCCAGCCTGGCCAAGGCGGTGGACGCGGCGCTGCTGATCCTGCACGGGCGCCTGGAGCAGGACCCG CCGACCCTGCACCGGCATTTCGACGATGTGCGCCTGGGCATCGACCAGACCCGCCTGGAGCAGATCCTGGTCAACCTGCTGGCCAACGCCCTCGACGCCA TGAGCGGGCAGGCCGACCGCCAGCTCTGGCTGGAAGGCCGGCGCGAGGAGGAGCGCTACGTCCTGCGCGTGCGCGACAACGGCCCCGGTATCCCGCCGGC GGCGCGCGTCCACCTGTTCGAACCCTTCTTCACCACCAAGCCCGGCGAACATGGCCTGGGCCTCGGCCTGACCCTCTCGGCCAGCCTGGCCACCGCCGCC GGCGGCAGCCTCAGCGTGCAGCACCCCGAAAGCGGCGGAACCGCCTTCGAGCTGAGCCTGTCCCTGGTTCCCGATTCCCCGACTGCGAGTCCCGCCCGAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGAGCCGCTTTCCGTCCTGATCGTCGAAGACGATCCGCATGTCTTGCTCGGCTGCCAGCAGGCGCTGGAGCTGGAGGACATCCCCTGCATCGGCGTCGG CAGCGCCGAGGAGGCGCTGCAACGGGTCGACCGCGACTTCGCCGGCATCGTCGTCAGCGACATCCGCCTGCCCGGCATCGACGGCCTGACCCTGCTGGAG CGTCTCAAGGCCCTCGACCCGAGCCTGCCGGTGGTGCTGATCACCGGTCACGGCGACATCTCCATGGCGGTACAGGCGATGCACGCCGGCGCCTACGACT TCATGGAGAAGCCCTTCTCTCCGGAACGCCTGGTCGAGGTCGCCCGCCGCGCCCTGGAGCAGCGCGGGCTGGCCCGCGAGGTCAGCGCGCTGCGTCGCCA GTTGGCCGGCCGCCAGGACCTGGCGCAACGGATCATCGGCCGCTCGCCGGCGATCCAGGCGTTGCGCGAGCTGATCGCCAACGTCGGCGACACCTCGGCC
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Amino Acid Sequence |
>two-component sensor
MESPDPPCSVPPSLTVKPRLVRQLLLPIPLLLLMLGFGYGGYRVSESAGIRALAENGERQLELHARTVESEISKYTYLPSLLELERSVSHLLTDPTPYRR NQVNAYLEGLNRRAGSRAVYLLDTNGRVLATSNWSDPDSYLGEDLSFRAYWQDAMKGKPGRFYGIGSTRGEPGYYLAHGLVHGGRIIGVAVVKVKMDALE ERWEKARLEAFVSDENGIIILSSNPALRLKAVRSLSADDKERLARSMQYYWWALNEWQPLLREPLAAGVEKLSFPADEQHPRGEAVTYLAQTRALNDTPW NLTLLSPLEDLRRDAVRNGMLAAIGFALLAFLLIAWNERRKVLATRLAAREALQRANGELEVKIAERTADLQASNARLTAEIHERQQAEDTLRKAQDELV QAGKLAVIGQMSTSIAHELNQPLAALRTLSGNTVRFLQRGKLETASTNLATINELVDRMGRITASLRAFARRSDDAGQASLAKAVDAALLILHGRLEQDP PTLHRHFDDVRLGIDQTRLEQILVNLLANALDAMSGQADRQLWLEGRREEERYVLRVRDNGPGIPPAARVHLFEPFFTTKPGEHGLGLGLTLSASLATAA GGSLSVQHPESGGTAFELSLSLVPDSPTASPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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