Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGACCTCATCGGCGACCACCTGCATGAGACGCTCGGCCTCGCCACCCGGCGGATATTCACGGGGAAATTCCGCCGCCCGCAGTAACAGTTCGCGCAGC AGGCCGGACACCTCCAGTACCCGGCAACCGCCGGGCAGCGAACGATCCAGGTAGAGACTGCGGAACAGCACAGGGTTGCAAGCCTCCGCGGCGTGCCGGA CGCCCGGCGGAATCCACAGCGCCCGCTGCGCCGGCACCAGATAGCTGTGCCGCTCGGTGCTGGCGCGCAAGGTGCCGCTGGCGGCGTACATCAGTTGGCC CCAGGGGTGGTCGTGCATCTCCACCCGGTGCCCGGCGGGCATCTCGAAGGCGCGCAGGTACACCGCGCAGGGCAGGCTGCGGAATCGCGGCAGCTCGCGT TCTTGTCCCGTTTGCGGCATCGGTTGTCCCCATCCGTCGAGTGAGCGGTGCGTGGCCGATGGTAGCGTGTGGCTCCCCATAGACAAACCGGAGCCACGCC
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DNA Sequence for Gene |
>Q011_03043
ATGAGCAGTCATCGCCCGCAACATCGCCTGTCCGTTCCCGATATCCAGCGCCGCAAGGGTGCCGGCAGCCTGGTGGCGCTGACCGCCTACAGCACGCCCA TGGCCCGCCTCCTCGATCCGCACGCCGACCTGCTGCTGGTCGGCGATTCGCTGGGCATGGTGCTCTATGGCATGCCCAGTACCCTGGGAGTGAGCCTGGA GATGATGGTCGCCCACACCCTGGCGGTGATGCGCGGCAGCCGGCGCGCCTGCGTGGTGGCCGACTTGCCGTTCGCCAGCTACCAGGAATCGCCCCGACAG GCGTTCCGCAACGCCGCACGCCTGCTGGCCGACAGCGGCGCCCAGGCGGTGAAGCTGGAAGGCGGTGAGGAAATGGAAGAAACCGTGGACTTCCTGGTAC GCCGTGGCATACCGGTGCTCGCCCATATCGGCCTGATGCCGCAGCAGGTCAACGCCATGGGCGGCTTCAAGGCCCAGGGGCGTGACCCGGAAAGCGCCGA ACGGGTACGCCGCGACGGCCTCGCCATGCAGCGCGGCGGCGCCTTCGCGGTGGTCATCGAAGGCGTAGGCGAGCCGCTGGCCCGTCGCCTTAGCGAAGAA CTGGCGATCCCCTGCATCGGTATCGGCGCCTCGCCGGCCTGCGACGGCCAGGTACTGGTCAGCGAGGACCTGCTCGGGCTAAGCGGCGAACAGGTACCGC GCTTCGTCGAACGCTACGCGCGCCTCGACCGGGAAATCGACGAGGCGGCCCGGCGCTTCGCCGAGGACGTGCGCGAAAGGCGCTTCCCCGAGGCCAGGCA TTGCTTCGCCATGCGCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCGGTCTCAGGCGAAGACTTCCGCCAGCAGGTCATCCATCGCCTGGAAGGCACGCCGGGAGGTCCTGGCGTCATAGTGCATCTTGCCCGGCACCTT GGCGTTCGGATCGGTGAAGGAATGCACCGCGCCGCCGTAGCTGGTGAGCTGCCAGTCGACGCCGGCATCGGTCATCTCCCTGGCGAAGGCCGGCAACTGC TCGCGCGGCACCAGCGGATCGGAGGCGCCGTCGAGGACCAGTACCGCGCCCTTGATATTCCTGGCATGCGCCGGGTCCGGCGTATCCAGGGTGCCATGGA AGGACACGAAGGCCTTCAGCTCGGCACCGTCGCGAGCCAGCTCCAGCGCGCAGCAACCGCCGAAGCAGAAACCGAAGGCGGCCTGGCGGGTCGTATCGAC AGCCGCGAGCGCCTGTCCGCGCAAGGCCGCCAGCGCTGCCTGCATGCGCTTGCGCAGCAGGGCCCGGTCGTTCTTCAGCGGCATCATCGCCGCGCCCGCC
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Amino Acid Sequence |
>3-methyl-2-oxobutanoate hydroxymethyltransferase
MSSHRPQHRLSVPDIQRRKGAGSLVALTAYSTPMARLLDPHADLLLVGDSLGMVLYGMPSTLGVSLEMMVAHTLAVMRGSRRACVVADLPFASYQESPRQ AFRNAARLLADSGAQAVKLEGGEEMEETVDFLVRRGIPVLAHIGLMPQQVNAMGGFKAQGRDPESAERVRRDGLAMQRGGAFAVVIEGVGEPLARRLSEE LAIPCIGIGASPACDGQVLVSEDLLGLSGEQVPRFVERYARLDREIDEAARRFAEDVRERRFPEARHCFAMRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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