Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTTGGGCAAGACGCACATCGCGTAATCGTAGGGAGCCTTGCTGGTGCTGGCGGCCAGCGCCGGGGCGTTCGAAGCGGGAGGCGAGGCACAGGCGGACAG GGCCAGGGCGGCGAATACAGCGATAAGAATCTTCATGTCACGTCCCTCTTTGTCGATCCGTTCACGATTCGACGGTATCACCGCCCAAAGCGAGAACTGC AGCGACTTCGCGGCATGGTACTTATCGATAAGGTTGATATTGCAGGCGCATGACGAAGCGATCCGGCAACGCCCGATTCAGAGCCTATGGAAGGGGCTTT CCTTGCGCTTTGGTTATTAGCAAATGACTCGAAGCTTTCTTGGATCGAACAATGTTCTGGTATTGTTGCGCCGCCAACGGGAGAAACAAGAAACCAGAAC CGCCACGCACGGTAAATGGGACAAATGACTCCCGTGCACTTCGAACCTTGCGCTTCCTTCAATTTCAGCGCACATCAAGCCAACAACCAGGAACAATAAG
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DNA Sequence for Gene |
>Q011_01623
ATGTTGAAGAAAAGGATTTGCCTGCTGGCACTGGGCATCGCGACTGCAAGCCAGGCGATGGCCAATGACCAAGAAGCAGCAAAGGGGTTTGTCGAGGACA GCCACCTCGATCTGTTCTTCCGCAATGCATATATCAAACGCGACAAGAAGTACGGTACAGAGGACCAAGCAGAGTGGGGCCAGGCCGCAACCGCGACCTT CACTTCCGGCTTCACCCAAGGAACCATCGGGATAGGTGTGGACGTGTTCGGTATGTACGCTGTTCGCTTGGACGGCGGCAAGGGTCGTAGCGGCGCCGCC GGTATCGACTTCTTCAAGCAGGGCGACAGCGGCTCCGCGGCGGACGATCTGTCCAAGGGCGGCGCGGCGGTGAAGTTCCGCATCTCCAACACCGTGCTCA AGTACGGCGACCAGATGCCCAGCCTGCCGGTGCTCAGCTACGACAACTCGCGCCTGCTCCCGGAAAGCTACAGCGGCACCCTGATCACCTCCAAGGAGAT CGAGGGCCTGGAGCTGAACGCCGGTCGCTTCACCGCGGAATCCCGCAAGAGCGCCGAAGGGCGCGACAGCGGCGGCCTGAAGAGCATCAACGTGTTCGGC GGCAAGTACGCCTTCACCGATCACTTCAACGCCTCGCTGTACGCTTCCGACGTCGAGGACGTACTGAAGAAGCAGTACATCAACCTGAACTACACCATCC CGCTGCAGGCCGACCAGTCGCTGAACTTCGACTTCAACGGCTATCGCACCAAGCTGGACAGCGACTTCGCCGACCAGAACTTCAACGGTAACCGCGACAA CAAGATCTGGAGCCTGGCGGCGTCCTACACCATCGACGCCCACACCTTCATGATCGCCCACCAGCGCAACACCGGCGACACCGGCTACAACTACGGCTGG TACCAGAACGCCGGCGGCATCGGCGACGGCGGCACCACCATCTGGCTGGCCAACTCCTACTGGTCGGACTTCAACGCCGAGGACGAGCGTTCCTGGCAGG TCAGCTACGCCCTGGACTTCGCCAAGTACGGCGTGCCCGGCCTGACCTACCGCGTAGCCTACGTGCGCGGCGACAACATCAAGACCGCCGAGACCAGCAA CGGCAAGGAGCGCGAGATCTTCAACCAGGTCCAGTACGTGGTGCAGAGCGGCCCGGCCAAGGACCTCACCCTGCGCCTGCGTAGCTCGTTTGCTCGCGTT TCCGCTGATGCCCGCGATAGCTACTTCAGTGGCGGCAACGAAATCCGTGCCTTCGTCGAGTACCCGTTCAGCGTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGAACCCACGAGCGCGACGAGAACCCCGGGCCAGTCCCGGGGTTTTCTTTTTTGCGTTTCGTGCTCCAGTTCAACCTTATCGGGTGGCGCCGCACAGCA TCGGAAAGCCGGTGATAGCATTCGCTCTCGCTTGCCATTGCTTATCGATATCGACAATGCCGTTCCGGAAACACCTTCTGCTCCCCCTCCTCGGTCTTGC CCTGCTGCTCGGCGGTTGCGGCCCCAGTGTCAGTTACTCCTACATTCCGCCGACCAGCGATGCCGGCCTGCACTGCGTGACCCAGTGCAATGCCGAGAAG CGCCAGTGCAAGACCCTCGCAAAGCTGCAGCAGCGCCAGGACGAGGCGCTCTACCAGGCGCAGAGCACGGCCTACAACTACTGCATGCAGAACAGCGACA AGAAGAAGCGCAAGTCCTGTCCCTACCCGCAGCGCAACTTCGATTTCGGCGACGACTGCCAGGACGAGTACCGCAGTTGCTACCAGTCCTGCGGCGGCAC
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Amino Acid Sequence |
>membrane protein
MLKKRICLLALGIATASQAMANDQEAAKGFVEDSHLDLFFRNAYIKRDKKYGTEDQAEWGQAATATFTSGFTQGTIGIGVDVFGMYAVRLDGGKGRSGAA GIDFFKQGDSGSAADDLSKGGAAVKFRISNTVLKYGDQMPSLPVLSYDNSRLLPESYSGTLITSKEIEGLELNAGRFTAESRKSAEGRDSGGLKSINVFG GKYAFTDHFNASLYASDVEDVLKKQYINLNYTIPLQADQSLNFDFNGYRTKLDSDFADQNFNGNRDNKIWSLAASYTIDAHTFMIAHQRNTGDTGYNYGW YQNAGGIGDGGTTIWLANSYWSDFNAEDERSWQVSYALDFAKYGVPGLTYRVAYVRGDNIKTAETSNGKEREIFNQVQYVVQSGPAKDLTLRLRSSFARV SADARDSYFSGGNEIRAFVEYPFSVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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