Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATGCTCGGGGAACACCACCACCGTGCGCTCGTTGAGCAGGCCCTGGCGGCGGGCATTTTCCAGGTAGGCGTGGAATTTCAGCTGCAACCGTTCGGCGCT CTGGTAGTCCGGCGTGAACAGTTCCGGCTGGACCGCCAGCAGGTTGCCGCGCTCGCCGGGCTGGCCCTGGACCACGCTGACCTGGCTGCGCAGGTCGGAC AGGTAGTGGCCTACCGGGCGGCGTTCGGCCCAGCCGGCGTAGGCGGCGAAGAGGGTGATGAGGATCAGGAAGATCAGCTTGCGCATGCGGGTCTCCAAGG CAGCCCACAGGGTAGGGGAGTGGCGTCGGCTTGCCAAGCATCCCTGTGCATTCCGATCAGTAACTTGTCATTTAGGATCATTGAGCGCTCCGGTGGCGCT CCTTAGAGTCGTCGCCATACCGACCGCTGCCCGTGCCGCGCATTGCGCCCGAGGCCGCGGCATATCCGTGAACGCGTTTCGCCCGATGTGGAGACCCCCG
|
|
DNA Sequence for Gene |
>Q011_01142
ATGACCGCCGCCGTTCCCTATCCGCACCTGCTCGCCCCGCTGGACCTCGGCTTCACCACCCTGCGCAACCGCACCCTGATGGGGTCCATGCACACTGGCC TGGAAGAGAAGCCGCAGGGCTTCGAGCGCATGGCGGCGTATTTCGCCGAACGCGCCCGTGGCGGCGTCGGCCTGATGGTCACCGGCGGCATCGGCCCGAA CGAAGAGGGCGGCGTGTATTCCGGCGCGGCCAAGCTGAGCACGCCGGAAGAGGCGGAGAAGCACAGGATCGTGACCCAGGCGGTGCATGAGGCGGGCGGC AAGATCTGCATGCAGATCCTGCATGCCGGCCGCTACGCCTACAGCCCGAAGCAGGTAGCGCCGAGCGCGATCCAGGCGCCGATCAATCCGTTCAAGCCCA AGGAACTCGACGAGGAAGGCATCGAGAAGCAGATCGCCGACTTCGTCAATTGCGCCAGCCTGGCCCAGGTCGCCGGCTACGATGGCGTCGAGATCATGGG GTCGGAAGGCTACTTCATCAACCAGTTCCTCGTGCAGCACACCAACCAGCGCACCGACCGCTGGGGCGGCAGCTACGAGAACCGCATGCGCCTGCCGGTG GAGATCGTCCGCCGGGTGCGCGAGGCGGTGGGGCCGAACTTCATCATCATCTATCGCCTGTCGATGCTCGACCTGGTCGAGGGCGGCAGCAGTTGGGACG AGATCGTGCTGCTGGCCAAGGCCGTCGAGAAGGCCGGCGCGACCCTGATCAACACCGGTATCGGCTGGCACGAGGCGCGCATCCCGACCATCGCCACCAA GGTGCCGCGCGCGGCCTTCACCAAGGTCACCGCCAAGCTGCGTGGCGAGGTCGGCATCCCGCTGATCACCACCAACCGCATCAACACTCCCGAGGTGGCG GAGAAGGTCCTGGCCGAGGGCGATGCCGACATGGTCTCCATGGCCCGGCCGTTCCTCGCCGACCCGGACTTCGTCAACAAGGCCGCCGCCGGCCACGCTG AACGGATCAACACCTGCATCGGCTGCAACCAGGCCTGCCTCGACCACACCTTCGGCGGCAAGCTGACCAGTTGCCTGGTCAACCCGCGCGCCTGCCACGA AACCGAGCTGAACTACATTCCCACCGCCAGGCCGAAGAAGATCGCCGTGGTCGGCGCCGGTCCGGCCGGCCTGGCCGCCGCCACCGTGGCCGCCGAGCGT GGGCACCGGGTCAGCCTGTTCGACGCCGCCGGCGAGATCGGCGGGCAGTTCAACGTGGCCAAGCGGGTTCCCGGCAAGGAAGAGTTCCACGAGACCCTGC GCTACTTCCGCAACAAGCTGGAGAGCACCGGCGTCGAGCTGCACCTGAACCGCCGGGTCGGCGTGGACGACCTGGTTGCGGGCGGTTATGACGAGATCGT CCTCGCCACCGGCATCGTTCCGCGCACGCCGGCGATCCCTGGCATCGAGCATCCGAAGGTGATCAGCTACCTGGATGCGATCCTCGAGCGCAAGCCGGTG GGCGGCAAGGTGGCGGTGATCGGCGCCGGCGGCATCGGCTTCGACGTCTCCGAATTCATCACCCATGCCGGTCCGTCCACCAGCCTGGAGCGCGAAGCGT TCTGGAAGCAGTGGGGGATCGATACCCGCCTGGAGGCCCGCGGCGGCATCGCCGGGGTCAAGGCCGAGGTGCATCCGGCAGCGCGCCAGGTGTTCCTCCT GCAACGCAAGAAGAGCAAGGTCGGCGACGGCCTCGGCAAGACCACCGGCTGGATCCATCGCGCCGGCCTGAAGAACAAGCAGGTGCAGATGGTGAATGCC GTGGAGTATCTCGGGATCGACGACGCCGGCCTGCATATCCGCGTTGCCGAGGGCGAGCCGCAGGTGCTGCCGGTGGATACCGTGATCGTCTGCGCCGGCC AGGACCCACTGCGCGAGTTGCAGGACGGCCTGCTGGCGGCCGGCCGGAGCGTGCACCTGATCGGCGGCGCCGATGTCGCCGCCGAGCTGGATGCCAAGCG CGCCATCAACCAGGGTTCGCGCCTGGCTGCCGAACTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GAACCTGTCCGCGATCTGTTGCGTAGCGGAGAAACTGCGTTGAAAACGGCTTTTCTCCAGCTCGCACAGGTTCTGCGTATCGTCCCTGTCCGCGCTCGTC GGCGCGGCGGGGCGCTGCGCACCGGTTTGGTGAACGGTGGCGCTCTGCCACGGTGATCTCCGTCCGCTCAAAACCCGACCGCTTCACAATTTCCCCTACC GCTCGGCGGGCCGTCCGGCATCGCCCGGGTGTCTGCCAACCCAGTCACATTGCCCGCGACATTTTTTCCCCTAGACTTGCCCGAACAACGAGATAGCGCC TGTTTTTCAGGTGACATGCCAGATGGGAACTGCCGGATGCGGGCCGCCTCGCCAGGCGTTCGAGGGTTAGCGATGAGCATGCAGAAAAAGCCACAGATGG CGGAGGCCGTGCTGTTCTTCAACGACAGCGGCGTCTGCAAGGAAATGCTGTATCCCGAATTCGAGGCGCTGCTCGATGGCCTGGTGCGCATGCCGGAATA
|
|
Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTAAVPYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPQGFERMAAYFAERARGGVGLMVTGGIGPNEEGGVYSGAAKLSTPEEAEKHRIVTQAVHEAGG KICMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQIADFVNCASLAQVAGYDGVEIMGSEGYFINQFLVQHTNQRTDRWGGSYENRMRLPV EIVRRVREAVGPNFIIIYRLSMLDLVEGGSSWDEIVLLAKAVEKAGATLINTGIGWHEARIPTIATKVPRAAFTKVTAKLRGEVGIPLITTNRINTPEVA EKVLAEGDADMVSMARPFLADPDFVNKAAAGHAERINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYIPTARPKKIAVVGAGPAGLAAATVAAER GHRVSLFDAAGEIGGQFNVAKRVPGKEEFHETLRYFRNKLESTGVELHLNRRVGVDDLVAGGYDEIVLATGIVPRTPAIPGIEHPKVISYLDAILERKPV GGKVAVIGAGGIGFDVSEFITHAGPSTSLEREAFWKQWGIDTRLEARGGIAGVKAEVHPAARQVFLLQRKKSKVGDGLGKTTGWIHRAGLKNKQVQMVNA VEYLGIDDAGLHIRVAEGEPQVLPVDTVIVCAGQDPLRELQDGLLAAGRSVHLIGGADVAAELDAKRAINQGSRLAAEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|