Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCCGCGCCTGGACCGCCTGGATTCGGCGCGGATCGGCAGCTCGCGGGCGATCACCCAGCTCATCCTGCACCTGGTCGAAGGCACGCCGATCCGCCTGG TCGACGGCGGCGCGCAGAAGCGCTGCTTCACCGACGTCGACGACGGCATCGAGGCCCTCGCGCGGATCATCGACAACCGCGACGGCCGCTGCGACGGGCA GATCGTCAACATCGGCAACCCGGACAACGAGGCGAGCATCCGCCAGCTCGGCGAGGAACTGCTGCGCCAGTTCGAGGCCCACCCGCTGCGCGCGCAGTTC CCGCCCTTCGCCGGCTTCCGCGAGGTGGAGAGCCGCAGCTTCTACGGCGACGGCTACCAGGACGTGGCCCACCGCAAGCCGAGCATCGACAACGCCCGGC GCCTGCTCGACTGGCAGCCCACCATCGAACTGCGCGAGACCATCGGCAAGACCCTCGACTTCTTCCTCCACGAAGCGCTCCGCGAGCGCGAGGCACAGGC
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DNA Sequence for Gene |
>Q011_00659
GTGATCCAGGCCGGCCTGCGCATCGACGTCGACACCTTCCGCGGCACCCGCGACGGGGTGCCGCGGCTGCTCGAGCTGCTCGACGAAGCCGGGCTGAAGG CGACCTTCTTCTTCAGCGTCGGCCCGGACAACATGGGCCGCCACCTCTGGCGCCTGGCGCGCCCGGCGTTCCTCTGGAAGATGCTCCGCTCGCGCGCCGC CAGCCTGTATGGCTGGGACATCCTGCTGGCCGGCACCGCCTGGCCGGGCAAGCCGATCGGCCGCGAACTCGGCCCGCTGATGCGGCGGACCCAGGCCGCC GGCCACGAGGTCGGCCTGCACGCCTGGGACCACCATGCCTGGCAGACCCACGCCGGCGTCTGGAGCGTGCAGCAGCTCGGCGAGCAGATCCGCCGCGGCA GCGATTGCCTGGCGGACATCCTCGGCCAGCCGGTGCGTTGTTCCGCCGCCGCCGGCTGGCGCGCCGACGGCCGGGTGGTCGAGGCCAAGCAGCCCTTCGG CTTCCGCTACAACAGCGACTGCCGCGGACGCGGCGCGTTCCGCCCACGCCTGGCCGACGGCAGCCCCGGCATCCCGCAGGTGCCGGTGAACCTGCCGACC TTCGACGAGGTGGTCGGTCCCGGCCTGCCGCGCGAGGCCTACAACGACTTCATCCTGGAACGCTTCGCCGCTGGCCGCGACAACGTCTACACCATCCACG CCGAGGTCGAGGGGCTGCTCCTCGCCCCGGCGTTCCGCGAACTGCTGCGGCGCGCCGAACGGCGTGGCATCCGCTTCCGACCGTTGGGCGAACTGCTGCC GGACGATCCGCGCAACCTGCCGCTGGCCGAACTGGTGCGAGGCCGCCTGGCCGGCCGCGAGGGCTGGCTGGGAGTGCGCCAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCCGCCAGACCTGGTCGCTGCTGCTGATCGCCTTCGGCCTGTTCTACCTGGTTCCACTGAGCAACCATGGCCTGTGGATTCCCGACGAGACCCGCTA CGCGCAGATCAGCCAGGCGATGCTGCTGGGCGGCGACTGGGTGTCGCCGCACTTCCTCGGCCTGCGCTACTTCGAGAAGCCGGTCGCCGGCTACTGGATG ATCGCCCTCGGCCAGGCGGTCTTCGGCGAAAACCTGTTCGGCGTGCGCATCGCCTCGGTCGTCGCCACCGCCCTCAGCGTCCTGCTCGCCTACCTGCTGG CCCGCCGCCTGTGGCGCGACCCGCGCACCAGCCTGGCGTGCGCGCTGCTCTACGCCAGCTTCGGCTTGATCGCCGGGCAGTCCGGCTATGCCAACCTCGA CCCGCAATTCACCTTCTGGGTCAACCTGAGCCTGGTGGCGCTGTGGTACGCCCTCGACGCGGGGAGCCGCCGCGCGCGCCTGCTCGGCTGGATCCTGCTC
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Amino Acid Sequence |
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MIQAGLRIDVDTFRGTRDGVPRLLELLDEAGLKATFFFSVGPDNMGRHLWRLARPAFLWKMLRSRAASLYGWDILLAGTAWPGKPIGRELGPLMRRTQAA GHEVGLHAWDHHAWQTHAGVWSVQQLGEQIRRGSDCLADILGQPVRCSAAAGWRADGRVVEAKQPFGFRYNSDCRGRGAFRPRLADGSPGIPQVPVNLPT FDEVVGPGLPREAYNDFILERFAAGRDNVYTIHAEVEGLLLAPAFRELLRRAERRGIRFRPLGELLPDDPRNLPLAELVRGRLAGREGWLGVRQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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