Pseudomonas aeruginosa 6077, Q011_00309

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACCAGGCGGTGGACCACCTGCTGCTCACCGGGTGCGGCAGGCGTACCGACGTACGCTGGCAGGGCGGGCTGGCCGCGCACGTGCGGCGGCGCCTGGCC GACTACATCGAAAGCCACCTGGAGCAGCCGCTGGAACTGGGGTCGCTGGCGGAGCTGGCGGCGCTCTCCGAGTACCACTTCGCGCGCATGTTCCGCGTCT CCTTCGGCCTGCCGCCGCACCGCTACGTGCTGGAACGACGCCTGGCGCGGGCCCGCGACCTGCTGGCGTACTCCGCGCAGTCGCTCCAGGAGGTCTCGCT GGCCTGCGGCTTCGCCAGTCCGAGCCATTTCAACCGGCGCTTCCGCGAAGCCCATGGCGCCACCCCGGGGCAGTACCGCGCCGCCCTGAAAGCCTCCTGA AAGCCAGGCGCCGACAGCCTGCGGTTGTAGGCAGGCATTCCCGCAGCATAAAATGATAACTATTATCATTCGTTAATCCTTCTGCTCCGGGAATGTCCAG
DNA Sequence for Gene
>Q011_00309
GTGTCGAGCGCCGACCTCGCCCACGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCTGCGGCGCCGCCTCGGCTGCC CGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGGCCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCAT CGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGACGTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTCCCCGAGCGGGAAGTCCCCAGCGAA GAGACCCGCGCCATCGTCCTGGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGTCTGCCGCCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAGCTCG ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCGCAACGCTGCTACTTCGCCGA GCTGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCGCCGCACCCAAGGTGCCGCCGCAGGTGGCCGAACAGGCCGTGCGCTGGCTGGTCGAGCTGCAGGGCGGCGCCGACGACGAACGCCTGCGCCA GGCCTGGCAGCGCTGGCGCCAGGCGGCCCCGGAACACGAGCAGGCCTGGCGCCACATCGAGGCGGTCAACCAGCGCCTGGCCGGGATAGGCACGCCACTG GCCCTGGCCGCCATCAACGCACCGCATTCGCCGCAACGCCGGCGCGCGCTGAAGACCCTGCTGCTGGTCCTGGCCGCCGGCGGCAGCGCCTGGGGCCTGC GCGAGAGCGGCAGCCTGCAGCGCTGGAGCGCCGACTATGCCACCGGCGTCGGCGAACGCCGGCGCCTGGCCCTGGCCGACGGCAGTCGCCTCGAGCTGAA CAGCGACACGGCGGTGGATGTACGCTTCGATGCCGGCGAACGGCGCCTGCTCCTGCTGCGCGGGGAAATCCAGCTCAGCACCGGCCAGGACCCGCGCCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSE ETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAELP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site