Strain | Pseudomonas aeruginosa 6077 genomic scaffold adgeN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGATGGATGCTTCGGGGTGCCAGCGGCGAAAGCGTTGCAGGACGCGTGGCAGCCAGGCGCTGGCGAAGTCCTCCGAAGCGCCGATGCGCAGGCGGTCG CGGATCGGCGTGCCGTGCAGCCTGGCGCGGGCCTCGCGCTCCAGCTCGACGATGTTGCGGGCATAGGCGTAGAGCGTCTCGCCCGCCTGGGTCAGCTCCA GGCGGCGAGTGGTGCGGCTGAGCAGGCTGACGCCGGCTGTCTGTTCCAGGCGCTTGATATGCCCGCTGACTGCGGAGGGGGTGAGCGCGAGATTGTCTGC GGCGAGGGCGAAACCGCCGCTGTCGACCACTTCGAGAAAGGTACGCAACAACACGATATCCAGGGATTGGGAGGTGGGGACGGCAAGCTCCATGAGGTCT TCCATTCATCTCGTTTCATGAATAGTAGACGCTAACTATTCATGAATCATCCTTGGCAAGCGTCCTAGGATGTCCCTTCGCTTTCTCTTGGAGAGGTCCG
|
|
DNA Sequence for Gene |
>Q011_00212
ATGAGCCGCTATGCCTTCGTTTCCACCGATGTCCTGGATATCGCCTACCTGGAGTGGAATCCGCAGGGGGCGCGCAGCGCCGTCTTGTTGCACGGTTGGC CGGACAGCCCGCATGCCTGGAAAGACCTGGCGCAGTCCCTGGCGGACGCCGGCTATCGGGTGCTGGCACCAGCCCTCCGGGGATTCGCCCCGACCCGCTT CCGCGATGCGTCTACTCCGCGCAGCGGGCAACTGGCGGCTCTGGCTTGCGATCTGCTGGCATTCGTCGACGGCCTGGCATTGCAACGTCCCCTGCTGGTC GGCCATGACTGGGGTGCCCGCGCGGTGGCCAGTGCCTGCGGACTGCGCGAGGGCTTCGCCTCGCACCTGGTGATGCTCTCGGTGGGGTACGCCAGTAACG ATCCGCAGCAAGTTCTTTCCCTGCCGCAGGCTCGTAGCTTCTGGTACCAGTGGTTCATGGCCACGCCACGCGGCGAGCGTGCGCTGCGCGAGGAGGGCGA GGCGTTCGCCCGGCAGATGTGGGACACCTGGTCGCCGCCGGGATGGTATGCCGAGCGCGATTTCCAGGAGGCCGCCCAGGCCTTCTCCGGGCCGGACTGG GTCGCCGTGGTGCTGCACTATTACCGGCATCGCTGGGGCTTCGTCGCGGGGGAGCCGCGCTACGGGGCGGCGGAACAGCGCTTGCTCCCGGCACCGCGCC TGGCGCTGCCGACCCTGGTGCTGCACGGCGGCGCGGATGCCTGCACCCACCCCGACGGCTCCCGCGGACGCGAGCACTACTTCAGCGGGCGTTACCAGCG GCTGGTGCTGGAGGGCGTCGGCCATTTTCCGCAGCGCGAGGCGGCCAATCAGGTGGCGGACGCTATCCTGCGGTTCTGCGCGGATGACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTCCTGGACGCCGCAGCGGCGGATAACGCCCGTGGCGTTATCCGCCCTACGAATCGGTGCGAAAGGTCTTGCTCGGCGGGACGAATGATCGCGTCGCGGT TATCCGCCGATGGGGCGGGGGGACGGCGGATAACTCGCCCTACGAACCGGTGTGCCGCGAGCGGTCGCGGCGGACGTGGGGTCGTAAGCTCCGCCGGCGG CCCTATGGCGTCCGCAGGCGGTCGAGCAGCGCCGGGGTCGGATAGCCGTCCGCCGGCCAGCCGAACTCCTGCTGGCAGGCGCGGATCGCCTTGCGCGTAT TGGCGCCGATGATGCCGTCCACCGCGCCCGGATCGTGTCCGCGGGCGGCCAGTTGCCGTTGCAGCTCGATGCGCTGCGAGCGGCTCAGCGGAACATCCTC CAGTGGCCAGGCGCCGACTATCCGGCCGCCGCCCTTGAAGCTGTCGGCGAGCAGGCCGACGGCCAGGGCATAGGCACTGGAGTTGTTGTACTTGAGGATG
|
|
Amino Acid Sequence |
>alpha/beta hydrolase
MSRYAFVSTDVLDIAYLEWNPQGARSAVLLHGWPDSPHAWKDLAQSLADAGYRVLAPALRGFAPTRFRDASTPRSGQLAALACDLLAFVDGLALQRPLLV GHDWGARAVASACGLREGFASHLVMLSVGYASNDPQQVLSLPQARSFWYQWFMATPRGERALREEGEAFARQMWDTWSPPGWYAERDFQEAAQAFSGPDW VAVVLHYYRHRWGFVAGEPRYGAAEQRLLPAPRLALPTLVLHGGADACTHPDGSRGREHYFSGRYQRLVLEGVGHFPQREAANQVADAILRFCADD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|