Pseudomonas aeruginosa X13273, Q013_05708

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa X13273 genomic scaffold adgeE-supercont1.6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGCGGGCTGACCGTGCTCGGCACCAGCGGCTACCTGGCGATGGTGATCCTCGGCTCCTACGTCGGCTACGTGGTCAGTGCCTTCCTCACCGACCTGAT CGGGCGCAAGAAGAACTTCGTCCTGTTCGCCGTCGGCTCCTTCACCGTGGTCCTGCTCTACACCCAGTTGCCGGTAAGCAACGGCGCCATGCTCTGGCTC GGCTTCCCGCTCGGCTTCTTCGCCTCGGGCATCTTCAGCGGCATGGGCTCGTTCCTCACCGAACTGTTCCCGACCCGCATCCGCGGCTCCGGCCAGGGCT TCTGCTACAACGCCGGGCGCGCCATCGCCGCGCTGTTCCCGATGCTGATCGGCATGCTCGGCCAGAAGCTCTCGCTGGGCCTGGGGATCGGCGCCTTCGC CGCGGTCTCCTACGGCGTGGTGATCCTCGCCGCCCTCAGCCTGCCGGAAACCCGCGGCAAACAACTGGAACTCTGAGCCGTCGACCGAGGAAACCCCAGC
DNA Sequence for Gene
>Q013_05708
ATGCATCCCACTCCCCGCCTGGCTGCCGCGCTGCTCGTCGGCAGCGGGCTGGGCTGGCCGCTGCTCGCCCAGGCCGACCTGGTCGAGGACAGCCACGCCA GCCTCGAACTGCGCAACTTCTACTTCAACCGCGACTTCCGCCAGAGCGGCGCGCGCAACAACGCCGACGAATGGGCGCAGGGCTTCCTCCTGCGCCTGGA GTCCGGCTTCAGCGAAGGCACCGTCGGCTTCGGCGTCGACGCCATCGGCCTGCTCGGCCTCAAGCTCGACTCCGGCGGCGGCAGCGGCGGAACCGGGCTG CTGCCGGCCGACGGCTCCGCCGGGGGTTCCCAGGACGACTACGCCAAGCTCGGCCTGACCGCCAAGGCGCGGGTCTCCAACAGCCTGCTCAAGGTCGGCG CGCTGCACTTCAAGAGCCCGCTGGTCTCGGCCAACGACACCCGCCTGCTGCCGGAACTGTTCCGCGGCGCGCTGCTCGACGTGCAGGAGATCGACGGCCT GACCCTGCGCGGCGCGCACCTGGACCGCAACAAGCTGAACAGCTCCAGCGACTACCAGGTGTTCAGCGCCAACCGCATCGGCGGGCGCAGCGATGCCTTC GACTTCGCCGGCGGCGACTATCGCCTGACCCCGGCGCTGACCGCCAGCCTGCACCAGGGTCGGCTCAAGGACATCTACCGACAGACCTTCGCCGGCCTGG TACACACCCTCGACCTCGGCGGACAGCGCTCGCTCAAGAGCGACCTGCGCTTCGCCCGGGCCAGCGAGGACGGCGGCTTCCGCGAACTGGACAACCGCGC CTTCGGCGCCCTCTTCAGCCTGCGCCTGGGCGCCCACGCGGTGGCCGCCGGCTACCAGCGGATCAGCGGCGACGATCCCTATCCCTACATCGCCGGCAGC GACCCGTACCTGGTCAACTTCATCCAGATCGGCGACTTCGGCAACGTCGACGAGCGCTCCTGGCAACTGCGCTACGACTACGATTTCGGCGCGCTCGGCC TGCCCGGCCTGAGCTTCATGAGCCGCTACGTCTCCGGCGACAACGTCGCCCGCGGCGCGGCCAACGACGGCAAGGAATGGGAACGCAACACCGACCTCGG CTACGTGGTGCAGAGCGGGCCGCTGAAGAACCTCGGAGTGAAATGGCGCAACGCCACGGTGCGTTCGAATTTCGCCAACGACCTCGACGAAAACCGCCTG ATCCTCAGCTACAGCCTGGCGCTGTGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCCGGCGAGCAATGACCTGAAGGAACCAGCATGAACAGCCTGTTGTTGAACTGCGATATCGGCGAGAGCTTCGGTGCCTGGAGCATGGGCCTGGACGC CGAGGTGATGCCGCTGATCGATTGCGCCAACATCGCCTGCGGCTTCCACGCCGGCGATCCCGGCACCATGCGCCGCACCGTGGCCCTGGCGGTGGAGCAT GGCGTGCGCATCGGCGCGCACCCCGGCTACCCCGACCTGGTCGGCTTCGGCCGGCGCTCGCTGGCCTGCTCGGCGCAGGAAGTGGAAGACCTGCTGCTCT ACCAGATCGGTGCCCTCGACGGACTCTGCCGCGCCCAGGGCGAACGGGTACGCTACGTCAAGCCGCACGGCGCGCTGTACCAGGACATGATGCGCGACCC GGCGATCCTCGCCGCCGTGCTGCGCGCACTGGCGGCCTACGACCGCACCCTGCCGCTGATGCTGATGAGCACCCGCGACAACACCGCGGCGCGCGCGCTG
Amino Acid Sequence
>porin
MHPTPRLAAALLVGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARNNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGLKLDSGGGSGGTGL LPADGSAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGRSDAF DFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDGGFRELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGS DPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFANDLDENRL ILSYSLALW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site